BLASTX nr result

ID: Coptis24_contig00028591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028591
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF...   136   3e-30
emb|CBI19268.3| unnamed protein product [Vitis vinifera]              136   3e-30
ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|2...   112   7e-23
ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putativ...   105   5e-21
ref|XP_002866405.1| hypothetical protein ARALYDRAFT_358300 [Arab...   104   1e-20

>ref|XP_002283825.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera]
          Length = 1261

 Score =  136 bits (343), Expect = 3e-30
 Identities = 68/125 (54%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
 Frame = +2

Query: 32   NEDIETQRRPLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPVPPLSSQSDNTQSPTKPEN 211
            N+D E++R+PLS+IGN   ++ AP+PN RKKW+KSVIQLV V P SSQ +NT++P K EN
Sbjct: 1136 NDDCESKRKPLSEIGNKMARAKAPKPNPRKKWRKSVIQLVSVAPPSSQPENTEAPKKAEN 1195

Query: 212  NMVEQDVPLRLPRAMRSATSNNDPLRERNSVQADECVGKRVEGSVVSPNSPTRQT-IISD 388
              VE D+PL+LPRAMRSA SN +P R RNS Q DE      E    +  SP RQ   + +
Sbjct: 1196 TAVEVDIPLKLPRAMRSAASNGNPFRVRNSDQPDESAANNKETVASASRSPVRQARTLDE 1255

Query: 389  KENHG 403
            KEN+G
Sbjct: 1256 KENYG 1260


>emb|CBI19268.3| unnamed protein product [Vitis vinifera]
          Length = 1279

 Score =  136 bits (343), Expect = 3e-30
 Identities = 68/125 (54%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
 Frame = +2

Query: 32   NEDIETQRRPLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPVPPLSSQSDNTQSPTKPEN 211
            N+D E++R+PLS+IGN   ++ AP+PN RKKW+KSVIQLV V P SSQ +NT++P K EN
Sbjct: 1154 NDDCESKRKPLSEIGNKMARAKAPKPNPRKKWRKSVIQLVSVAPPSSQPENTEAPKKAEN 1213

Query: 212  NMVEQDVPLRLPRAMRSATSNNDPLRERNSVQADECVGKRVEGSVVSPNSPTRQT-IISD 388
              VE D+PL+LPRAMRSA SN +P R RNS Q DE      E    +  SP RQ   + +
Sbjct: 1214 TAVEVDIPLKLPRAMRSAASNGNPFRVRNSDQPDESAANNKETVASASRSPVRQARTLDE 1273

Query: 389  KENHG 403
            KEN+G
Sbjct: 1274 KENYG 1278


>ref|XP_002301096.1| predicted protein [Populus trichocarpa] gi|222842822|gb|EEE80369.1|
            predicted protein [Populus trichocarpa]
          Length = 1290

 Score =  112 bits (279), Expect = 7e-23
 Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 31/165 (18%)
 Frame = +2

Query: 2    ALSAKPNNVKNEDIETQRRPLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPVPPLSSQSD 181
            AL  KP    ++ +   R+PLSDIGNT  KSNAP  N+RKKW+KSVIQLVPVPP +++S+
Sbjct: 1128 ALVEKPRETSDDSV-VGRKPLSDIGNTMAKSNAPNANQRKKWRKSVIQLVPVPPPTTKSE 1186

Query: 182  NTQSP------------------------------TKPENNMVEQDVPLRLPRAMRSATS 271
            NT++                               ++ +N   E ++PLRLPRAMRSA+ 
Sbjct: 1187 NTEAAPQKADDNGASEADIPLKLPRAMRSAAPNTVSETDNGASEAEIPLRLPRAMRSASH 1246

Query: 272  NNDPLRERNSVQADECVGKRVEGSVVSPNSPTRQTIISD-KENHG 403
                LR+RN+ QA+E + K  E  V+   SP R    SD KEN+G
Sbjct: 1247 GGIFLRDRNADQAEESINK--ETGVLPTRSPARPKRTSDEKENYG 1289


>ref|XP_002514043.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis]
            gi|223547129|gb|EEF48626.1| Chromosome-associated kinesin
            KIF4A, putative [Ricinus communis]
          Length = 1290

 Score =  105 bits (263), Expect = 5e-21
 Identities = 63/128 (49%), Positives = 89/128 (69%), Gaps = 4/128 (3%)
 Frame = +2

Query: 32   NEDIETQRRPLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPVPPL--SSQSDNTQSPTKP 205
            N+D   +R+PLSDIGNT  KSNAP+ +++KKW+KS IQLVPV PL  ++Q + T++  KP
Sbjct: 1165 NDDGPVRRKPLSDIGNTVAKSNAPKGDQKKKWRKSTIQLVPVVPLPTTTQPEKTEAAQKP 1224

Query: 206  ENNMV-EQDVPLRLPRAMRSATSNNDPLRERNSVQADECVGKRVEGSVVSPNSPTRQTII 382
            +NN   E D PL+LPRA+ +A++++  LRERN+ Q++E V K  E  V    SP R    
Sbjct: 1225 DNNSAGEVDGPLKLPRAI-AASNSSGLLRERNAGQSNEVVNK--ENVVHPTRSPARPPRT 1281

Query: 383  S-DKENHG 403
            S +KEN+G
Sbjct: 1282 SEEKENYG 1289


>ref|XP_002866405.1| hypothetical protein ARALYDRAFT_358300 [Arabidopsis lyrata subsp.
            lyrata] gi|297312240|gb|EFH42664.1| hypothetical protein
            ARALYDRAFT_358300 [Arabidopsis lyrata subsp. lyrata]
          Length = 1341

 Score =  104 bits (260), Expect = 1e-20
 Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 15/148 (10%)
 Frame = +2

Query: 2    ALSAKPNNVKNEDIETQRR--PLSDIGNTEVKSNAPRPNRRKKWKKSVIQLVPV-PPLSS 172
            AL+ KP    NED  T+RR  PLSDIGNT  KSN PRP++RKKWKK+V+QLVPV PP SS
Sbjct: 1193 ALADKPGEETNEDGGTRRRRKPLSDIGNTTGKSNVPRPSQRKKWKKTVLQLVPVGPPASS 1252

Query: 173  QSD------NTQSPTKPENNM--VEQDVPLRLPRAMRSATSN-NDPLRERNSVQADECVG 325
            Q +      ++++   PEN+       + L+LPRAMRSA+SN ++ LRERN   AD+  G
Sbjct: 1253 QEEANPVTLDSEAARMPENSESGESNSIKLKLPRAMRSASSNGSNLLRERN---ADQTGG 1309

Query: 326  KRV-EGSVVSPNS--PTRQTIISDKENH 400
            + V  G  V  NS   +      +KENH
Sbjct: 1310 ESVGNGGFVQSNSGRASGSRTSDEKENH 1337


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