BLASTX nr result

ID: Coptis24_contig00028573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028573
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302868.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_003633298.1| PREDICTED: cellulose synthase-like protein H...   147   9e-34
emb|CBI28826.3| unnamed protein product [Vitis vinifera]              147   9e-34
emb|CAN66095.1| hypothetical protein VITISV_017805 [Vitis vinifera]   147   9e-34
ref|XP_002269831.2| PREDICTED: cellulose synthase-like protein H...   146   2e-33

>ref|XP_002302868.1| predicted protein [Populus trichocarpa] gi|222844594|gb|EEE82141.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  148 bits (373), Expect = 5e-34
 Identities = 66/88 (75%), Positives = 72/88 (81%)
 Frame = +1

Query: 1   PTHPHHFKAGAMNVLTRVSGVMTNAPFMLNVDCDMFANNPNIVLHAMCLLLGHEKERDSA 180
           P HPHH+KAGAMNVLTRVSG+MTNAPFMLN+DCDMF NNP IV HAMCLLLG   E +S 
Sbjct: 260 PKHPHHYKAGAMNVLTRVSGMMTNAPFMLNLDCDMFVNNPKIVCHAMCLLLGSRNEMESG 319

Query: 181 FVQCPQLFYGGLKDDPFGNQMVVWQGYL 264
           FVQ PQ FY GLKDDP+GNQ  VW  Y+
Sbjct: 320 FVQFPQYFYDGLKDDPYGNQFEVWHKYI 347


>ref|XP_003633298.1| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]
          Length = 766

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/88 (77%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   PTHPHHFKAGAMNVLTRVSGVMTNAPFMLNVDCDMFANNPNIVLHAMCLLLGHEKERDSA 180
           P HPHH+KAGAMNVLTRVSG MTNAPFMLNVDCDM+ANNP I  HAMCLLLG + E+D  
Sbjct: 264 PKHPHHYKAGAMNVLTRVSGAMTNAPFMLNVDCDMYANNPQIFHHAMCLLLGSKNEQDCG 323

Query: 181 FVQCPQLFYGGLKDDPFGNQMVVWQGYL 264
           FVQ PQ FY GLKDDPFGNQ+VV   YL
Sbjct: 324 FVQSPQCFYDGLKDDPFGNQLVVLYKYL 351


>emb|CBI28826.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/88 (77%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   PTHPHHFKAGAMNVLTRVSGVMTNAPFMLNVDCDMFANNPNIVLHAMCLLLGHEKERDSA 180
           P HPHH+KAGAMNVLTRVSG MTNAPFMLNVDCDM+ANNP I  HAMCLLLG + E+D  
Sbjct: 264 PKHPHHYKAGAMNVLTRVSGAMTNAPFMLNVDCDMYANNPQIFHHAMCLLLGSKNEQDCG 323

Query: 181 FVQCPQLFYGGLKDDPFGNQMVVWQGYL 264
           FVQ PQ FY GLKDDPFGNQ+VV   YL
Sbjct: 324 FVQSPQCFYDGLKDDPFGNQLVVLYKYL 351


>emb|CAN66095.1| hypothetical protein VITISV_017805 [Vitis vinifera]
          Length = 579

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/88 (77%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   PTHPHHFKAGAMNVLTRVSGVMTNAPFMLNVDCDMFANNPNIVLHAMCLLLGHEKERDSA 180
           P HPHH+KAGAMNVLTRVSG MTNAPFMLNVDCDM+ANNP I  HAMCLLLG + E+D  
Sbjct: 198 PKHPHHYKAGAMNVLTRVSGAMTNAPFMLNVDCDMYANNPQIFHHAMCLLLGSKNEQDCG 257

Query: 181 FVQCPQLFYGGLKDDPFGNQMVVWQGYL 264
           FVQ PQ FY GLKDDPFGNQ+VV   YL
Sbjct: 258 FVQSPQCFYDGLKDDPFGNQLVVLYKYL 285


>ref|XP_002269831.2| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]
           gi|297739173|emb|CBI28824.3| unnamed protein product
           [Vitis vinifera]
          Length = 751

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/88 (77%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   PTHPHHFKAGAMNVLTRVSGVMTNAPFMLNVDCDMFANNPNIVLHAMCLLLGHEKERDSA 180
           P HPHH+KAGAMNVLTRVSG MTNAPFMLNVDCDM+ANNP I  HAMCLLLG + E+D  
Sbjct: 264 PKHPHHYKAGAMNVLTRVSGAMTNAPFMLNVDCDMYANNPLIFHHAMCLLLGSKNEQDCG 323

Query: 181 FVQCPQLFYGGLKDDPFGNQMVVWQGYL 264
           FVQ PQ FY GLKDDPFGNQ+VV   YL
Sbjct: 324 FVQSPQCFYDGLKDDPFGNQLVVLYKYL 351


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