BLASTX nr result
ID: Coptis24_contig00028563
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028563 (480 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: R... 123 2e-26 ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliop... 123 2e-26 gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii... 122 2e-26 gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii... 122 2e-26 gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii... 122 2e-26 >sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=Ubiquitin-related 1; Contains: RecName: Full=Ubiquitin-related 2; Flags: Precursor gi|433970|emb|CAA82268.1| polyubiquitin [Acetabularia peniculus] Length = 423 Score = 123 bits (308), Expect = 2e-26 Identities = 65/133 (48%), Positives = 92/133 (69%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S T++ VK+ I+ EGI D+QRL +LE+ +TLAD +I + TL L+ Sbjct: 53 TITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVL 112 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V SSDT+++VK + +GIPPDQQRLIF G+ ED RT Sbjct: 113 RLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 172 Query: 351 LSNYSVEDGSTIH 389 L++Y+++ ST+H Sbjct: 173 LADYNIQKESTLH 185 Score = 121 bits (304), Expect = 5e-26 Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S T++ VK+ I+ EGI D+QRL +LE+ TLAD +I + TL L+ Sbjct: 129 TITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 188 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V SSDT+++VK + +GIPPDQQRLIF G+ ED RT Sbjct: 189 RLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 248 Query: 351 LSNYSVEDGSTIH 389 L++Y+++ ST+H Sbjct: 249 LADYNIQKESTLH 261 Score = 121 bits (304), Expect = 5e-26 Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S T++ VK+ I+ EGI D+QRL +LE+ TLAD +I + TL L+ Sbjct: 205 TITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 264 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V SSDT+++VK + +GIPPDQQRLIF G+ ED RT Sbjct: 265 RLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 324 Query: 351 LSNYSVEDGSTIH 389 L++Y+++ ST+H Sbjct: 325 LADYNIQKESTLH 337 Score = 120 bits (302), Expect = 9e-26 Identities = 64/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S T++ VK+ I+ EGI D+QRL +LE+ TLAD +I + TL L+ Sbjct: 281 TITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 340 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V SSDT+++VK + +GIPPDQQR+IF G+ ED RT Sbjct: 341 RLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRT 400 Query: 351 LSNYSVEDGSTIH 389 L++Y+++ ST+H Sbjct: 401 LADYNIQKESTLH 413 Score = 101 bits (251), Expect = 7e-20 Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 4/109 (3%) Frame = +3 Query: 75 IEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY----GMHIFVKSLTGKKLKLNVLS 242 I D+QRL +LE+ TLAD +I + TL L+ GM IFVK+LTGK + L V S Sbjct: 1 IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVQS 60 Query: 243 SDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYSVEDGSTIH 389 SDT+++VK + +GIPPDQQRLIF G+ ED TL++Y+++ ST+H Sbjct: 61 SDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLH 109 >ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC 42464] gi|347011403|gb|AEO58888.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC 42464] Length = 305 Score = 123 bits (308), Expect = 2e-26 Identities = 67/133 (50%), Positives = 90/133 (67%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S TI+ VKN I+ EGI D+QRL +LE+ TL+D +I + TL L+ Sbjct: 88 TITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 147 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V S+DTI+ VK + +GIPPDQQRLIF G+ ED RT Sbjct: 148 RLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT 207 Query: 351 LSNYSVEDGSTIH 389 LS+Y+++ ST+H Sbjct: 208 LSDYNIQKESTLH 220 Score = 123 bits (308), Expect = 2e-26 Identities = 67/133 (50%), Positives = 90/133 (67%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S TI+ VKN I+ EGI D+QRL +LE+ TL+D +I + TL L+ Sbjct: 164 TITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V S+DTI+ VK + +GIPPDQQRLIF G+ ED RT Sbjct: 224 RLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT 283 Query: 351 LSNYSVEDGSTIH 389 LS+Y+++ ST+H Sbjct: 284 LSDYNIQKESTLH 296 Score = 121 bits (304), Expect = 5e-26 Identities = 66/133 (49%), Positives = 90/133 (67%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S +I+ VKN I+ EGI D+QRL +LE+ TL+D +I + TL L+ Sbjct: 12 TITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V S+DTI+ VK + +GIPPDQQRLIF G+ ED RT Sbjct: 72 RLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT 131 Query: 351 LSNYSVEDGSTIH 389 LS+Y+++ ST+H Sbjct: 132 LSDYNIQKESTLH 144 Score = 81.6 bits (200), Expect = 6e-14 Identities = 38/68 (55%), Positives = 51/68 (75%) Frame = +3 Query: 186 MHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYS 365 M IFVK+LTGK + L V S+D+I+ VK + +GIPPDQQRLIF G+ ED RTLS+Y+ Sbjct: 1 MQIFVKTLTGKTITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60 Query: 366 VEDGSTIH 389 ++ ST+H Sbjct: 61 IQKESTLH 68 >gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff] Length = 229 Score = 122 bits (307), Expect = 2e-26 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S TI+ VK I+ EGI D+QRL +LE+ TLAD +I + TL L+ Sbjct: 12 TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V SSDTI++VK+ + +GIPPDQQRLIF G+ ED RT Sbjct: 72 RLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131 Query: 351 LSNYSVEDGSTIH 389 L++Y+++ ST+H Sbjct: 132 LADYNIQKESTLH 144 Score = 122 bits (307), Expect = 2e-26 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S TI+ VK I+ EGI D+QRL +LE+ TLAD +I + TL L+ Sbjct: 88 TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V SSDTI++VK+ + +GIPPDQQRLIF G+ ED RT Sbjct: 148 RLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207 Query: 351 LSNYSVEDGSTIH 389 L++Y+++ ST+H Sbjct: 208 LADYNIQKESTLH 220 Score = 84.7 bits (208), Expect = 7e-15 Identities = 39/68 (57%), Positives = 53/68 (77%) Frame = +3 Query: 186 MHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYS 365 M IFVK+LTGK + L V SSDTI++VK+ + +GIPPDQQRLIF G+ ED RTL++Y+ Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 366 VEDGSTIH 389 ++ ST+H Sbjct: 61 IQKESTLH 68 >gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff] Length = 220 Score = 122 bits (307), Expect = 2e-26 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S TI+ VK I+ EGI D+QRL +LE+ TLAD +I + TL L+ Sbjct: 79 TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 138 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V SSDTI++VK+ + +GIPPDQQRLIF G+ ED RT Sbjct: 139 RLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 198 Query: 351 LSNYSVEDGSTIH 389 L++Y+++ ST+H Sbjct: 199 LADYNIQKESTLH 211 Score = 117 bits (293), Expect = 1e-24 Identities = 65/129 (50%), Positives = 88/129 (68%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S TI+ VK I+ EGI D+QRL +LE+ TLAD +I + TL LI Sbjct: 12 TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLI- 70 Query: 183 GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNY 362 FVK+LTGK + L V SSDTI++VK+ + +GIPPDQQRLIF G+ ED RTL++Y Sbjct: 71 ----FVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 126 Query: 363 SVEDGSTIH 389 +++ ST+H Sbjct: 127 NIQKESTLH 135 Score = 84.7 bits (208), Expect = 7e-15 Identities = 39/68 (57%), Positives = 53/68 (77%) Frame = +3 Query: 186 MHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYS 365 M IFVK+LTGK + L V SSDTI++VK+ + +GIPPDQQRLIF G+ ED RTL++Y+ Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 366 VEDGSTIH 389 ++ ST+H Sbjct: 61 IQKESTLH 68 >gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff] Length = 153 Score = 122 bits (307), Expect = 2e-26 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 4/133 (3%) Frame = +3 Query: 3 TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182 TI L+V+S TI+ VK I+ EGI D+QRL +LE+ TLAD +I + TL L+ Sbjct: 12 TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71 Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350 GM IFVK+LTGK + L V SSDTI++VK+ + +GIPPDQQRLIF G+ ED RT Sbjct: 72 RLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131 Query: 351 LSNYSVEDGSTIH 389 L++Y+++ ST+H Sbjct: 132 LADYNIQKESTLH 144 Score = 84.7 bits (208), Expect = 7e-15 Identities = 39/68 (57%), Positives = 53/68 (77%) Frame = +3 Query: 186 MHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYS 365 M IFVK+LTGK + L V SSDTI++VK+ + +GIPPDQQRLIF G+ ED RTL++Y+ Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 366 VEDGSTIH 389 ++ ST+H Sbjct: 61 IQKESTLH 68