BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028563
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: R...   123   2e-26
ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliop...   123   2e-26
gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii...   122   2e-26
gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii...   122   2e-26
gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii...   122   2e-26

>sp|P42739.2|UBIQP_ACECL RecName: Full=Polyubiquitin; Contains: RecName: Full=Ubiquitin;
           Contains: RecName: Full=Ubiquitin-related 1; Contains:
           RecName: Full=Ubiquitin-related 2; Flags: Precursor
           gi|433970|emb|CAA82268.1| polyubiquitin [Acetabularia
           peniculus]
          Length = 423

 Score =  123 bits (308), Expect = 2e-26
 Identities = 65/133 (48%), Positives = 92/133 (69%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  T++ VK+ I+  EGI  D+QRL     +LE+ +TLAD +I +  TL L+ 
Sbjct: 53  TITLEVQSSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLHLVL 112

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V SSDT+++VK  +   +GIPPDQQRLIF G+  ED RT
Sbjct: 113 RLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 172

Query: 351 LSNYSVEDGSTIH 389
           L++Y+++  ST+H
Sbjct: 173 LADYNIQKESTLH 185



 Score =  121 bits (304), Expect = 5e-26
 Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  T++ VK+ I+  EGI  D+QRL     +LE+  TLAD +I +  TL L+ 
Sbjct: 129 TITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 188

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V SSDT+++VK  +   +GIPPDQQRLIF G+  ED RT
Sbjct: 189 RLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 248

Query: 351 LSNYSVEDGSTIH 389
           L++Y+++  ST+H
Sbjct: 249 LADYNIQKESTLH 261



 Score =  121 bits (304), Expect = 5e-26
 Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  T++ VK+ I+  EGI  D+QRL     +LE+  TLAD +I +  TL L+ 
Sbjct: 205 TITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 264

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V SSDT+++VK  +   +GIPPDQQRLIF G+  ED RT
Sbjct: 265 RLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRT 324

Query: 351 LSNYSVEDGSTIH 389
           L++Y+++  ST+H
Sbjct: 325 LADYNIQKESTLH 337



 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/133 (48%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  T++ VK+ I+  EGI  D+QRL     +LE+  TLAD +I +  TL L+ 
Sbjct: 281 TITLEVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 340

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V SSDT+++VK  +   +GIPPDQQR+IF G+  ED RT
Sbjct: 341 RLRGGMQIFVKTLTGKTITLEVESSDTVENVKSKIQDKEGIPPDQQRIIFAGKQLEDGRT 400

Query: 351 LSNYSVEDGSTIH 389
           L++Y+++  ST+H
Sbjct: 401 LADYNIQKESTLH 413



 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/109 (48%), Positives = 73/109 (66%), Gaps = 4/109 (3%)
 Frame = +3

Query: 75  IEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY----GMHIFVKSLTGKKLKLNVLS 242
           I  D+QRL     +LE+  TLAD +I +  TL L+     GM IFVK+LTGK + L V S
Sbjct: 1   IPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVQS 60

Query: 243 SDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYSVEDGSTIH 389
           SDT+++VK  +   +GIPPDQQRLIF G+  ED  TL++Y+++  ST+H
Sbjct: 61  SDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGLTLADYNIQKESTLH 109


>ref|XP_003664133.1| hypothetical protein MYCTH_2315548 [Myceliophthora thermophila ATCC
           42464] gi|347011403|gb|AEO58888.1| hypothetical protein
           MYCTH_2315548 [Myceliophthora thermophila ATCC 42464]
          Length = 305

 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/133 (50%), Positives = 90/133 (67%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  TI+ VKN I+  EGI  D+QRL     +LE+  TL+D +I +  TL L+ 
Sbjct: 88  TITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 147

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V S+DTI+ VK  +   +GIPPDQQRLIF G+  ED RT
Sbjct: 148 RLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 351 LSNYSVEDGSTIH 389
           LS+Y+++  ST+H
Sbjct: 208 LSDYNIQKESTLH 220



 Score =  123 bits (308), Expect = 2e-26
 Identities = 67/133 (50%), Positives = 90/133 (67%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  TI+ VKN I+  EGI  D+QRL     +LE+  TL+D +I +  TL L+ 
Sbjct: 164 TITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V S+DTI+ VK  +   +GIPPDQQRLIF G+  ED RT
Sbjct: 224 RLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT 283

Query: 351 LSNYSVEDGSTIH 389
           LS+Y+++  ST+H
Sbjct: 284 LSDYNIQKESTLH 296



 Score =  121 bits (304), Expect = 5e-26
 Identities = 66/133 (49%), Positives = 90/133 (67%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  +I+ VKN I+  EGI  D+QRL     +LE+  TL+D +I +  TL L+ 
Sbjct: 12  TITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 71

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V S+DTI+ VK  +   +GIPPDQQRLIF G+  ED RT
Sbjct: 72  RLRGGMQIFVKTLTGKTITLEVESADTIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 351 LSNYSVEDGSTIH 389
           LS+Y+++  ST+H
Sbjct: 132 LSDYNIQKESTLH 144



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/68 (55%), Positives = 51/68 (75%)
 Frame = +3

Query: 186 MHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYS 365
           M IFVK+LTGK + L V S+D+I+ VK  +   +GIPPDQQRLIF G+  ED RTLS+Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESADSIETVKNKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 366 VEDGSTIH 389
           ++  ST+H
Sbjct: 61  IQKESTLH 68


>gb|ELR19129.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 229

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  TI+ VK  I+  EGI  D+QRL     +LE+  TLAD +I +  TL L+ 
Sbjct: 12  TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V SSDTI++VK+ +   +GIPPDQQRLIF G+  ED RT
Sbjct: 72  RLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 351 LSNYSVEDGSTIH 389
           L++Y+++  ST+H
Sbjct: 132 LADYNIQKESTLH 144



 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  TI+ VK  I+  EGI  D+QRL     +LE+  TLAD +I +  TL L+ 
Sbjct: 88  TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 147

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V SSDTI++VK+ +   +GIPPDQQRLIF G+  ED RT
Sbjct: 148 RLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 207

Query: 351 LSNYSVEDGSTIH 389
           L++Y+++  ST+H
Sbjct: 208 LADYNIQKESTLH 220



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/68 (57%), Positives = 53/68 (77%)
 Frame = +3

Query: 186 MHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYS 365
           M IFVK+LTGK + L V SSDTI++VK+ +   +GIPPDQQRLIF G+  ED RTL++Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 366 VEDGSTIH 389
           ++  ST+H
Sbjct: 61  IQKESTLH 68


>gb|ELR17350.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 220

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  TI+ VK  I+  EGI  D+QRL     +LE+  TLAD +I +  TL L+ 
Sbjct: 79  TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 138

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V SSDTI++VK+ +   +GIPPDQQRLIF G+  ED RT
Sbjct: 139 RLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 198

Query: 351 LSNYSVEDGSTIH 389
           L++Y+++  ST+H
Sbjct: 199 LADYNIQKESTLH 211



 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/129 (50%), Positives = 88/129 (68%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  TI+ VK  I+  EGI  D+QRL     +LE+  TLAD +I +  TL LI 
Sbjct: 12  TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLI- 70

Query: 183 GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNY 362
               FVK+LTGK + L V SSDTI++VK+ +   +GIPPDQQRLIF G+  ED RTL++Y
Sbjct: 71  ----FVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADY 126

Query: 363 SVEDGSTIH 389
           +++  ST+H
Sbjct: 127 NIQKESTLH 135



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/68 (57%), Positives = 53/68 (77%)
 Frame = +3

Query: 186 MHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYS 365
           M IFVK+LTGK + L V SSDTI++VK+ +   +GIPPDQQRLIF G+  ED RTL++Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 366 VEDGSTIH 389
           ++  ST+H
Sbjct: 61  IQKESTLH 68


>gb|ELR13775.1| polyubiquitin, putative [Acanthamoeba castellanii str. Neff]
          Length = 153

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 4/133 (3%)
 Frame = +3

Query: 3   TINLKVKSWYTIKIVKNVIESMEGIEADKQRLYIGEVKLENDVTLADLSIPRGQTLSLIY 182
           TI L+V+S  TI+ VK  I+  EGI  D+QRL     +LE+  TLAD +I +  TL L+ 
Sbjct: 12  TITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 71

Query: 183 ----GMHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRT 350
               GM IFVK+LTGK + L V SSDTI++VK+ +   +GIPPDQQRLIF G+  ED RT
Sbjct: 72  RLRGGMQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRT 131

Query: 351 LSNYSVEDGSTIH 389
           L++Y+++  ST+H
Sbjct: 132 LADYNIQKESTLH 144



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/68 (57%), Positives = 53/68 (77%)
 Frame = +3

Query: 186 MHIFVKSLTGKKLKLNVLSSDTIKDVKEMVHQVDGIPPDQQRLIFNGRAFEDSRTLSNYS 365
           M IFVK+LTGK + L V SSDTI++VK+ +   +GIPPDQQRLIF G+  ED RTL++Y+
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 366 VEDGSTIH 389
           ++  ST+H
Sbjct: 61  IQKESTLH 68