BLASTX nr result

ID: Coptis24_contig00028525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028525
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Viti...   320   1e-85
emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]   320   1e-85
ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricin...   311   3e-83
ref|XP_004160825.1| PREDICTED: CMP-sialic acid transporter 1-lik...   309   2e-82
ref|XP_004140889.1| PREDICTED: CMP-sialic acid transporter 1-lik...   309   2e-82

>ref|XP_002280548.1| PREDICTED: CMP-sialic acid transporter [Vitis vinifera]
           gi|297745398|emb|CBI40478.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  320 bits (819), Expect = 1e-85
 Identities = 157/178 (88%), Positives = 166/178 (93%)
 Frame = -1

Query: 536 TLSQSDGGYKYDYATVPFLAEVFKXXXXXXXLWRELRASSSPRMATDWKSVRLFPIPSII 357
           TLSQS+GGYKYDYATVPFLAEVFK       LWRE + S  PRM T+WKS+RLFPIPSII
Sbjct: 22  TLSQSNGGYKYDYATVPFLAEVFKLLVSSVLLWRECKRSPPPRMTTEWKSIRLFPIPSII 81

Query: 356 YLIHNNVQFATLTYVDTSTYQIMGNMKIVTTGILFRLFLRRKLSNLQWIAIVLLAVGTTT 177
           YLIHNNVQFATLTYVDTSTYQIMGN+KIVTTGILFRLFLRRKLSNLQW+AIVLLA+GTTT
Sbjct: 82  YLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKLSNLQWMAIVLLAIGTTT 141

Query: 176 SQVKGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKNNDSLYWQNVQLY 3
           SQV+GCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKN+DSLYWQNVQLY
Sbjct: 142 SQVRGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKNDDSLYWQNVQLY 199


>emb|CAN60247.1| hypothetical protein VITISV_039397 [Vitis vinifera]
          Length = 392

 Score =  320 bits (819), Expect = 1e-85
 Identities = 157/178 (88%), Positives = 166/178 (93%)
 Frame = -1

Query: 536 TLSQSDGGYKYDYATVPFLAEVFKXXXXXXXLWRELRASSSPRMATDWKSVRLFPIPSII 357
           TLSQS+GGYKYDYATVPFLAEVFK       LWRE + S  PRM T+WKS+RLFPIPSII
Sbjct: 83  TLSQSNGGYKYDYATVPFLAEVFKLLVSSVLLWRECKRSPPPRMTTEWKSIRLFPIPSII 142

Query: 356 YLIHNNVQFATLTYVDTSTYQIMGNMKIVTTGILFRLFLRRKLSNLQWIAIVLLAVGTTT 177
           YLIHNNVQFATLTYVDTSTYQIMGN+KIVTTGILFRLFLRRKLSNLQW+AIVLLA+GTTT
Sbjct: 143 YLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKLSNLQWMAIVLLAIGTTT 202

Query: 176 SQVKGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKNNDSLYWQNVQLY 3
           SQV+GCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKN+DSLYWQNVQLY
Sbjct: 203 SQVRGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKNDDSLYWQNVQLY 260


>ref|XP_002532660.1| cmp-sialic acid transporter, putative [Ricinus communis]
           gi|223527620|gb|EEF29733.1| cmp-sialic acid transporter,
           putative [Ricinus communis]
          Length = 335

 Score =  311 bits (798), Expect = 3e-83
 Identities = 153/178 (85%), Positives = 163/178 (91%)
 Frame = -1

Query: 536 TLSQSDGGYKYDYATVPFLAEVFKXXXXXXXLWRELRASSSPRMATDWKSVRLFPIPSII 357
           TLSQS+G YKYDYATVPFLAEVFK       LWRE + S  P+M TDWK+VRLFPIPSII
Sbjct: 22  TLSQSNGKYKYDYATVPFLAEVFKLIVSSFLLWRECKKSPLPKMTTDWKTVRLFPIPSII 81

Query: 356 YLIHNNVQFATLTYVDTSTYQIMGNMKIVTTGILFRLFLRRKLSNLQWIAIVLLAVGTTT 177
           YLIHNNVQFATL YVDTSTYQIMGN+KIVTTGILFRLFL++KLSNLQW+AI LLAVGTTT
Sbjct: 82  YLIHNNVQFATLIYVDTSTYQIMGNLKIVTTGILFRLFLKKKLSNLQWMAIALLAVGTTT 141

Query: 176 SQVKGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKNNDSLYWQNVQLY 3
           SQVKGCGEASCDSLFS+PIQGYMLGILSACLSALAGVYTEFLMKKNNDSLYWQN+QLY
Sbjct: 142 SQVKGCGEASCDSLFSSPIQGYMLGILSACLSALAGVYTEFLMKKNNDSLYWQNIQLY 199


>ref|XP_004160825.1| PREDICTED: CMP-sialic acid transporter 1-like [Cucumis sativus]
          Length = 337

 Score =  309 bits (791), Expect = 2e-82
 Identities = 152/178 (85%), Positives = 163/178 (91%)
 Frame = -1

Query: 536 TLSQSDGGYKYDYATVPFLAEVFKXXXXXXXLWRELRASSSPRMATDWKSVRLFPIPSII 357
           TLSQS+G Y YDYATVPFLAEVFK       LW+E + S  P+M TDW++VRL+PIPSII
Sbjct: 22  TLSQSNGRYDYDYATVPFLAEVFKLFVSSLFLWKESQKSPPPKMTTDWRTVRLYPIPSII 81

Query: 356 YLIHNNVQFATLTYVDTSTYQIMGNMKIVTTGILFRLFLRRKLSNLQWIAIVLLAVGTTT 177
           YLIHNNVQFATLTYVDTSTYQIMGN+KIVTTGILFRLFLRRKLSNLQW+AIVLLAVGTTT
Sbjct: 82  YLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKLSNLQWMAIVLLAVGTTT 141

Query: 176 SQVKGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKNNDSLYWQNVQLY 3
           SQVKGCGEASC+SL SAPIQGYMLGILSACLSALAG+YTEFLMKKNNDSLYWQNVQLY
Sbjct: 142 SQVKGCGEASCESLLSAPIQGYMLGILSACLSALAGIYTEFLMKKNNDSLYWQNVQLY 199


>ref|XP_004140889.1| PREDICTED: CMP-sialic acid transporter 1-like [Cucumis sativus]
          Length = 337

 Score =  309 bits (791), Expect = 2e-82
 Identities = 152/178 (85%), Positives = 163/178 (91%)
 Frame = -1

Query: 536 TLSQSDGGYKYDYATVPFLAEVFKXXXXXXXLWRELRASSSPRMATDWKSVRLFPIPSII 357
           TLSQS+G Y YDYATVPFLAEVFK       LW+E + S  P+M TDW++VRL+PIPSII
Sbjct: 22  TLSQSNGRYDYDYATVPFLAEVFKLFVSSLFLWKESQKSPPPKMTTDWRTVRLYPIPSII 81

Query: 356 YLIHNNVQFATLTYVDTSTYQIMGNMKIVTTGILFRLFLRRKLSNLQWIAIVLLAVGTTT 177
           YLIHNNVQFATLTYVDTSTYQIMGN+KIVTTGILFRLFLRRKLSNLQW+AIVLLAVGTTT
Sbjct: 82  YLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRKLSNLQWMAIVLLAVGTTT 141

Query: 176 SQVKGCGEASCDSLFSAPIQGYMLGILSACLSALAGVYTEFLMKKNNDSLYWQNVQLY 3
           SQVKGCGEASC+SL SAPIQGYMLGILSACLSALAG+YTEFLMKKNNDSLYWQNVQLY
Sbjct: 142 SQVKGCGEASCESLLSAPIQGYMLGILSACLSALAGIYTEFLMKKNNDSLYWQNVQLY 199


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