BLASTX nr result

ID: Coptis24_contig00028508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028508
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133826.1| PREDICTED: BTB/POZ domain-containing protein...    68   9e-23
gb|ADN34171.1| ATPOB protein binding [Cucumis melo subsp. melo]        68   9e-23
ref|XP_002320175.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-23
ref|XP_003637209.1| Kelch-like protein [Medicago truncatula] gi|...    68   2e-22
gb|AFK39130.1| unknown [Lotus japonicus]                               68   2e-22

>ref|XP_004133826.1| PREDICTED: BTB/POZ domain-containing protein At2g46260-like
           [Cucumis sativus] gi|449480287|ref|XP_004155851.1|
           PREDICTED: BTB/POZ domain-containing protein
           At2g46260-like [Cucumis sativus]
          Length = 553

 Score = 67.8 bits (164), Expect(2) = 9e-23
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   VVYLDLTREEYGNMFPIGRVYSQPFHLGGQDFFVSAHCSV 122
           VVYLDL REE  N+FP GRVYSQ FHLGGQ FF+SAHC++
Sbjct: 423 VVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNM 462



 Score = 63.9 bits (154), Expect(2) = 9e-23
 Identities = 31/47 (65%), Positives = 33/47 (70%)
 Frame = +2

Query: 149 HCFRLFWVMKEKGSESLLVKYEFAERSKLTEEFMMKYKNQYKITGGK 289
           HCF LF  M+EKGS S  V YEFA RSK TEEF+ KYK  Y  TGGK
Sbjct: 469 HCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGK 515


>gb|ADN34171.1| ATPOB protein binding [Cucumis melo subsp. melo]
          Length = 552

 Score = 67.8 bits (164), Expect(2) = 9e-23
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   VVYLDLTREEYGNMFPIGRVYSQPFHLGGQDFFVSAHCSV 122
           VVYLDL REE  N+FP GRVYSQ FHLGGQ FF+SAHC++
Sbjct: 422 VVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNM 461



 Score = 63.9 bits (154), Expect(2) = 9e-23
 Identities = 31/47 (65%), Positives = 33/47 (70%)
 Frame = +2

Query: 149 HCFRLFWVMKEKGSESLLVKYEFAERSKLTEEFMMKYKNQYKITGGK 289
           HCF LF  M+EKGS S  V YEFA RSK TEEF+ KYK  Y  TGGK
Sbjct: 468 HCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGK 514


>ref|XP_002320175.1| predicted protein [Populus trichocarpa] gi|222860948|gb|EEE98490.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score = 67.8 bits (164), Expect(2) = 9e-23
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   VVYLDLTREEYGNMFPIGRVYSQPFHLGGQDFFVSAHCSV 122
           VVYLDL REE  N+FP GRVYSQ FHLGGQ FF+SAHC++
Sbjct: 417 VVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNM 456



 Score = 63.9 bits (154), Expect(2) = 9e-23
 Identities = 31/47 (65%), Positives = 33/47 (70%)
 Frame = +2

Query: 149 HCFRLFWVMKEKGSESLLVKYEFAERSKLTEEFMMKYKNQYKITGGK 289
           HCF LF  M+EKGS S  V YEFA RSK TEEF+ KYK  Y  TGGK
Sbjct: 463 HCFGLFLGMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGK 509


>ref|XP_003637209.1| Kelch-like protein [Medicago truncatula]
           gi|355503144|gb|AES84347.1| Kelch-like protein [Medicago
           truncatula]
          Length = 591

 Score = 67.8 bits (164), Expect(2) = 2e-22
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   VVYLDLTREEYGNMFPIGRVYSQPFHLGGQDFFVSAHCSV 122
           VVYLDL REE  N+FP GRVYSQ FHLGGQ FF+SAHC++
Sbjct: 461 VVYLDLKREECSNLFPSGRVYSQAFHLGGQGFFLSAHCNM 500



 Score = 62.8 bits (151), Expect(2) = 2e-22
 Identities = 30/47 (63%), Positives = 33/47 (70%)
 Frame = +2

Query: 149 HCFRLFWVMKEKGSESLLVKYEFAERSKLTEEFMMKYKNQYKITGGK 289
           HCF LF  M+EKGS S  V YEFA RS+ TEEF+ KYK  Y  TGGK
Sbjct: 507 HCFGLFLGMQEKGSVSFTVDYEFAARSRPTEEFVSKYKGNYTFTGGK 553


>gb|AFK39130.1| unknown [Lotus japonicus]
          Length = 556

 Score = 67.8 bits (164), Expect(2) = 2e-22
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 3   VVYLDLTREEYGNMFPIGRVYSQPFHLGGQDFFVSAHCSV 122
           VVYLDL REE  N+FP GRVYSQ FHLGGQ FF+SAHC++
Sbjct: 426 VVYLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNM 465



 Score = 62.8 bits (151), Expect(2) = 2e-22
 Identities = 30/47 (63%), Positives = 33/47 (70%)
 Frame = +2

Query: 149 HCFRLFWVMKEKGSESLLVKYEFAERSKLTEEFMMKYKNQYKITGGK 289
           HCF LF  M+EKGS S  V YEFA RS+ TEEF+ KYK  Y  TGGK
Sbjct: 472 HCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYTFTGGK 518


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