BLASTX nr result

ID: Coptis24_contig00028500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028500
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607672.1| F-box family-10 [Medicago truncatula] gi|355...    63   2e-08

>ref|XP_003607672.1| F-box family-10 [Medicago truncatula] gi|355508727|gb|AES89869.1|
           F-box family-10 [Medicago truncatula]
          Length = 388

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
 Frame = -2

Query: 457 KLVLIDCIW-NIEVVNIYAPALENLMINDASYAADNIYDFEIKIYAESLITLDLVSKFAY 281
           KLVL  C W NIE +++  P L  L I  + + A  + + ++KI AE+L++        +
Sbjct: 188 KLVLHGCDWKNIEEISVVMPTLRELSITFSRFHAHYLVNSKVKIDAENLLSFSCRGCLTF 247

Query: 280 KFSLHNLSSLSKASVDFHSEH-----VIEDRVSKLIEGIGNVKDLMLSSEAVEILFVANL 116
           +F L NL+S+  A +DF S              KL+ G+  V+ L L+ + +E L     
Sbjct: 248 EFVLVNLTSIVNAYIDFKSGFPSNYLYTAAHEIKLLSGLHRVESLSLTIDTLECLSYTKD 307

Query: 115 TVELL-AFPNLKSLRVHIQGGYVYGEMLTEL 26
           T+ LL  F NL  L V++   Y +GE + ++
Sbjct: 308 TLHLLPCFCNLTLLNVNLSTPY-FGEEIAKI 337


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