BLASTX nr result

ID: Coptis24_contig00028470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028470
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling com...    81   1e-13
ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling com...    81   1e-13
ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling com...    77   1e-12
ref|XP_003546090.1| PREDICTED: putative chromatin-remodeling com...    77   1e-12
ref|XP_003542922.1| PREDICTED: putative chromatin-remodeling com...    77   1e-12

>ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling complex ATPase chain isoform
            2 [Vitis vinifera]
          Length = 1068

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/52 (80%), Positives = 46/52 (88%)
 Frame = +2

Query: 2    ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157
            ERQARKEKKLAK+MTPSKRA+ RQ  ESP S +KKRKQ LMDDY+SSGKRRK
Sbjct: 1018 ERQARKEKKLAKNMTPSKRAMARQATESPTS-VKKRKQLLMDDYVSSGKRRK 1068


>ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling complex ATPase chain isoform
            1 [Vitis vinifera] gi|297736902|emb|CBI26103.3| unnamed
            protein product [Vitis vinifera]
          Length = 1080

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/52 (80%), Positives = 46/52 (88%)
 Frame = +2

Query: 2    ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157
            ERQARKEKKLAK+MTPSKRA+ RQ  ESP S +KKRKQ LMDDY+SSGKRRK
Sbjct: 1030 ERQARKEKKLAKNMTPSKRAMARQATESPTS-VKKRKQLLMDDYVSSGKRRK 1080


>ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
            isoform 2 [Glycine max]
          Length = 1064

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +2

Query: 2    ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157
            ERQARKEKKLAKSMTPSKRA+ RQT    PS++KKRKQ  MDDY S+GKRRK
Sbjct: 1015 ERQARKEKKLAKSMTPSKRALARQT--ESPSSLKKRKQLTMDDYASTGKRRK 1064


>ref|XP_003546090.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
            isoform 1 [Glycine max]
          Length = 1072

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +2

Query: 2    ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157
            ERQARKEKKLAKSMTPSKRA+ RQT    PS++KKRKQ  MDDY S+GKRRK
Sbjct: 1023 ERQARKEKKLAKSMTPSKRALARQT--ESPSSLKKRKQLTMDDYASTGKRRK 1072


>ref|XP_003542922.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
            isoform 2 [Glycine max]
          Length = 1062

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/52 (76%), Positives = 44/52 (84%)
 Frame = +2

Query: 2    ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157
            ERQARKEKKLAKSMTPSKRA+ RQT    PS++KKRKQ  MDDY S+GKRRK
Sbjct: 1013 ERQARKEKKLAKSMTPSKRALARQT--ESPSSLKKRKQLTMDDYASTGKRRK 1062


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