BLASTX nr result
ID: Coptis24_contig00028470
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028470 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling com... 81 1e-13 ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling com... 81 1e-13 ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling com... 77 1e-12 ref|XP_003546090.1| PREDICTED: putative chromatin-remodeling com... 77 1e-12 ref|XP_003542922.1| PREDICTED: putative chromatin-remodeling com... 77 1e-12 >ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling complex ATPase chain isoform 2 [Vitis vinifera] Length = 1068 Score = 80.9 bits (198), Expect = 1e-13 Identities = 42/52 (80%), Positives = 46/52 (88%) Frame = +2 Query: 2 ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157 ERQARKEKKLAK+MTPSKRA+ RQ ESP S +KKRKQ LMDDY+SSGKRRK Sbjct: 1018 ERQARKEKKLAKNMTPSKRAMARQATESPTS-VKKRKQLLMDDYVSSGKRRK 1068 >ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling complex ATPase chain isoform 1 [Vitis vinifera] gi|297736902|emb|CBI26103.3| unnamed protein product [Vitis vinifera] Length = 1080 Score = 80.9 bits (198), Expect = 1e-13 Identities = 42/52 (80%), Positives = 46/52 (88%) Frame = +2 Query: 2 ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157 ERQARKEKKLAK+MTPSKRA+ RQ ESP S +KKRKQ LMDDY+SSGKRRK Sbjct: 1030 ERQARKEKKLAKNMTPSKRAMARQATESPTS-VKKRKQLLMDDYVSSGKRRK 1080 >ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like isoform 2 [Glycine max] Length = 1064 Score = 77.4 bits (189), Expect = 1e-12 Identities = 40/52 (76%), Positives = 44/52 (84%) Frame = +2 Query: 2 ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157 ERQARKEKKLAKSMTPSKRA+ RQT PS++KKRKQ MDDY S+GKRRK Sbjct: 1015 ERQARKEKKLAKSMTPSKRALARQT--ESPSSLKKRKQLTMDDYASTGKRRK 1064 >ref|XP_003546090.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like isoform 1 [Glycine max] Length = 1072 Score = 77.4 bits (189), Expect = 1e-12 Identities = 40/52 (76%), Positives = 44/52 (84%) Frame = +2 Query: 2 ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157 ERQARKEKKLAKSMTPSKRA+ RQT PS++KKRKQ MDDY S+GKRRK Sbjct: 1023 ERQARKEKKLAKSMTPSKRALARQT--ESPSSLKKRKQLTMDDYASTGKRRK 1072 >ref|XP_003542922.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like isoform 2 [Glycine max] Length = 1062 Score = 77.4 bits (189), Expect = 1e-12 Identities = 40/52 (76%), Positives = 44/52 (84%) Frame = +2 Query: 2 ERQARKEKKLAKSMTPSKRAIPRQTAESPPSTMKKRKQTLMDDYLSSGKRRK 157 ERQARKEKKLAKSMTPSKRA+ RQT PS++KKRKQ MDDY S+GKRRK Sbjct: 1013 ERQARKEKKLAKSMTPSKRALARQT--ESPSSLKKRKQLTMDDYASTGKRRK 1062