BLASTX nr result

ID: Coptis24_contig00028465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028465
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265117.2| PREDICTED: serine/threonine-protein kinase A...    69   3e-10
emb|CBI24068.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_003530528.1| PREDICTED: serine/threonine-protein kinase A...    60   1e-07
ref|NP_178731.2| protein kinase domain-containing protein [Arabi...    59   3e-07
gb|AAC69121.1| putative protein kinase [Arabidopsis thaliana]          59   3e-07

>ref|XP_002265117.2| PREDICTED: serine/threonine-protein kinase At5g01020-like [Vitis
           vinifera]
          Length = 512

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
 Frame = +1

Query: 196 LMGNCLTLEQHM--LPQNPSEHICNDAGTSPTKPNRXXXXXXXXXXXX---------VAP 342
           LMG C + ++H   +  NP E + +   TSPTK N+                     V P
Sbjct: 56  LMGICFSSQEHRSSINYNPVE-VGHVPATSPTKENKEAATSPRKPASDGRETATSIHVVP 114

Query: 343 KNVKDLRQNPGYSNVDIFTYEELRLATNNFLP 438
           KNVKDLRQNPGY NVD+FTYEE+RLAT  F P
Sbjct: 115 KNVKDLRQNPGYWNVDVFTYEEMRLATKLFRP 146


>emb|CBI24068.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 11/92 (11%)
 Frame = +1

Query: 196 LMGNCLTLEQHM--LPQNPSEHICNDAGTSPTKPNRXXXXXXXXXXXX---------VAP 342
           LMG C + ++H   +  NP E + +   TSPTK N+                     V P
Sbjct: 80  LMGICFSSQEHRSSINYNPVE-VGHVPATSPTKENKEAATSPRKPASDGRETATSIHVVP 138

Query: 343 KNVKDLRQNPGYSNVDIFTYEELRLATNNFLP 438
           KNVKDLRQNPGY NVD+FTYEE+RLAT  F P
Sbjct: 139 KNVKDLRQNPGYWNVDVFTYEEMRLATKLFRP 170


>ref|XP_003530528.1| PREDICTED: serine/threonine-protein kinase At5g01020-like [Glycine
           max]
          Length = 379

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/80 (42%), Positives = 44/80 (55%)
 Frame = +1

Query: 199 MGNCLTLEQHMLPQNPSEHICNDAGTSPTKPNRXXXXXXXXXXXXVAPKNVKDLRQNPGY 378
           MG C ++E      +P+    +D+   P KP              +A  N+KDLR+  GY
Sbjct: 1   MGICFSIE------DPNNLSISDSNAKPNKP------AGHESGAPLASMNIKDLREGAGY 48

Query: 379 SNVDIFTYEELRLATNNFLP 438
           SNVDIFTYEELRLAT +F P
Sbjct: 49  SNVDIFTYEELRLATKHFRP 68


>ref|NP_178731.2| protein kinase domain-containing protein [Arabidopsis thaliana]
           gi|334184157|ref|NP_001189514.1| protein kinase
           domain-containing protein [Arabidopsis thaliana]
           gi|23297644|gb|AAN12999.1| putative protein kinase
           [Arabidopsis thaliana] gi|110741931|dbj|BAE98906.1|
           putative protein kinase [Arabidopsis thaliana]
           gi|330250944|gb|AEC06038.1| protein kinase
           domain-containing protein [Arabidopsis thaliana]
           gi|330250945|gb|AEC06039.1| protein kinase
           domain-containing protein [Arabidopsis thaliana]
          Length = 442

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +1

Query: 334 VAPKNVKDLRQNPGYSNVDIFTYEELRLATNNFLP 438
           +APKN+KDL+ NPGY NVDIFTYEE+++AT  F P
Sbjct: 58  LAPKNIKDLQSNPGYENVDIFTYEEMKIATKQFRP 92


>gb|AAC69121.1| putative protein kinase [Arabidopsis thaliana]
          Length = 423

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +1

Query: 334 VAPKNVKDLRQNPGYSNVDIFTYEELRLATNNFLP 438
           +APKN+KDL+ NPGY NVDIFTYEE+++AT  F P
Sbjct: 39  LAPKNIKDLQSNPGYENVDIFTYEEMKIATKQFRP 73


Top