BLASTX nr result
ID: Coptis24_contig00028458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00028458
(1055 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510056.1| conserved hypothetical protein [Ricinus comm... 81 1e-21
ref|XP_002271921.1| PREDICTED: uncharacterized protein LOC100263... 87 2e-21
ref|XP_002302391.1| predicted protein [Populus trichocarpa] gi|2... 100 5e-19
ref|XP_002298790.1| predicted protein [Populus trichocarpa] gi|2... 81 1e-16
ref|XP_002313192.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-16
>ref|XP_002510056.1| conserved hypothetical protein [Ricinus communis]
gi|223550757|gb|EEF52243.1| conserved hypothetical
protein [Ricinus communis]
Length = 368
Score = 80.9 bits (198), Expect(2) = 1e-21
Identities = 75/224 (33%), Positives = 108/224 (48%), Gaps = 16/224 (7%)
Frame = -2
Query: 946 AELDSFSSASTTMVHDLCSDSDMEDGIPXXXXXXXXXXXXXXXXXXSKLWNRVTIT---- 779
AELD FSSAS++ + + CS + P L N +
Sbjct: 90 AELDRFSSASSSTMFNSCSTGSDAEDTPTTQQKDQLLYKANTSQPFI-LCNPIEKEVGKL 148
Query: 778 --DRALQCEYVEESKQHSPVSVLEELPSDEVSPFRKHIRWCSRTDKKEIPSVPNFIQPLR 605
+R L+ + +EES+Q SPVSVLEE S S K+ K S +F+ P +
Sbjct: 149 HQNRKLRWQCIEESRQLSPVSVLEEAASHSASQLHKY---------KVKDSKSSFLFPKK 199
Query: 604 VTDDLILSASLWDLLGNSSRNKHGS-GGNRDIRKL---TGTSSSSQYRKT-KRVLEQTDQ 440
VT+D ILSASL +L S K + G +I++L ++SS+Y K+ L+QT Q
Sbjct: 200 VTEDSILSASLRKVLFQSENQKKPTLAGVSEIQELVQSNNNNASSRYLKSNSSALQQTRQ 259
Query: 439 LLFDCVREALQTHGKDE----QVNNLLGAEDIGK-MICEQICFW 323
LLFDCVRE + + E Q L +E +GK +I ++I W
Sbjct: 260 LLFDCVREIVDNQERKEKPHQQQQEYLASEYLGKHVIGDKIKCW 303
Score = 49.7 bits (117), Expect(2) = 1e-21
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = -1
Query: 254 QCGNVTNITQLIRSSLCESVDEKNAFKAQTRKIGIDISNAILEEIVSEV 108
Q G +N+ +L++S L +SV E N F++Q R+IG +I NAI EE+ +E+
Sbjct: 306 QSGEASNLAELLQSDLLDSVQEWNGFESQRREIGFEIGNAISEEMETEI 354
>ref|XP_002271921.1| PREDICTED: uncharacterized protein LOC100263462 [Vitis vinifera]
Length = 349
Score = 87.4 bits (215), Expect(2) = 2e-21
Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 3/156 (1%)
Frame = -2
Query: 781 TDRALQCEYVEESKQHSPVSVLEELPSDEVSPFRKHIRWCSRTDKKEIPSVPNFIQPLRV 602
TD LQ ++++ +Q SPVSVLE LPS++ F + +R ++EI S +F R
Sbjct: 152 TDTNLQWSFMDD-RQLSPVSVLETLPSNQAQHF-----FIAR--QEEILSTSSFNLQKRT 203
Query: 601 TDDLILSASLWDLLGNSSRNKHGSGGNRDIRKLTGTSSSSQYRKTKRVLEQTDQLLFDCV 422
T++ SA W+LL S G + ++ G + SSQ KTKR+++ T Q+ FDC
Sbjct: 204 TENSTASAFPWELLIQSHP------GIAKLEEIFGFAGSSQCLKTKRIMQHTKQVSFDCE 257
Query: 421 REALQTHGKDEQV---NNLLGAEDIGKMICEQICFW 323
+EA++ HGK V G E+ K ICE IC+W
Sbjct: 258 KEAIEIHGKKSNVQKNEEFPGDEEPSKNICEHICYW 293
Score = 42.4 bits (98), Expect(2) = 2e-21
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = -1
Query: 254 QCGNVTNITQLIRSSLCESVDEKNAFKAQTRKIGIDISNAILEEIVSEVSDGF 96
QCG+VT+IT+LI S + E + + T +IGI+I++AI++ IV+++ + F
Sbjct: 296 QCGDVTSITKLINSDSSTTKQEWSDSQPLTIEIGIEIADAIMDHIVTDIINFF 348
>ref|XP_002302391.1| predicted protein [Populus trichocarpa] gi|222844117|gb|EEE81664.1|
predicted protein [Populus trichocarpa]
Length = 418
Score = 100 bits (250), Expect = 5e-19
Identities = 81/252 (32%), Positives = 125/252 (49%), Gaps = 8/252 (3%)
Frame = -2
Query: 1054 LLKTLLNKLVSNKEDLHSPESS----ECRTIQDRKHIVHVAELDSFSSASTTMVHDLCSD 887
+L+ +L +++S K+ L S + + + + VAE D FS+AS+T V + S
Sbjct: 77 VLRAVLKQVISIKQMLRINSSDHRGGKLKVNEKGRSNQQVAESDIFSTASSTTVFNSISK 136
Query: 886 SDMEDGIPXXXXXXXXXXXXXXXXXXSKLWNRVTITDRALQCEYVEESKQHSPVSVLEEL 707
S++E + T DR LQ +E+S+Q SP SVLE +
Sbjct: 137 SEVEAPCATQKDSLLTTNTCYQPLNLHNPTDE-TAADRKLQQRGIEDSRQLSPASVLEGI 195
Query: 706 PSDEVSPFRKHIRWCSRTDKKEIPSVPNFIQPLRVTDDLILSASLWDLLGNSSRNKHGSG 527
PS SPF+ S T ++E P P R+T+D ILSASL +L S K
Sbjct: 196 PSHGRSPFQNSNTEDSSTAEEENPLKTGVHLPKRLTEDCILSASLRKVLFYSPNEKPICA 255
Query: 526 GNRDIRKLTGTSSSSQYRKTKRVLEQTDQLLFDCVREALQTHGKDEQV----NNLLGAED 359
+ ++L + S QY K+K VL+QT QLLFD V+E ++T G++ + LG+E+
Sbjct: 256 EATERQELVQSYFSPQYLKSKMVLQQTKQLLFDYVKEIVETKGREMKQQCHHKQFLGSEE 315
Query: 358 IGKMICEQICFW 323
+G +I E+ W
Sbjct: 316 LGSIIGEKTRPW 327
>ref|XP_002298790.1| predicted protein [Populus trichocarpa] gi|222846048|gb|EEE83595.1|
predicted protein [Populus trichocarpa]
Length = 346
Score = 81.3 bits (199), Expect(2) = 1e-16
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Frame = -2
Query: 778 DRALQCEYVEESKQHSPVSVLEELPSDEVSPFRKHIRWCSRTDKKEIPSVPNFIQPLRVT 599
D LQ E EE++ SPVSV +ELPS + + +++E S + + V
Sbjct: 150 DINLQWECKEENELLSPVSVQKELPSINKA----------KQEEEEDASASSTVLSTNVE 199
Query: 598 DDLILSASLWDLLGNSSRNKHGSGGNRDIRKLTGTSSSSQYRKTKRVLEQTDQLLFDCVR 419
+D +LSA L DLL S K G +++++ + SQ+ K +RVL Q QLLFDCV
Sbjct: 200 EDSLLSAFLCDLLIKSLIEKKSVAGFTELQEMI-VPAFSQHLKNRRVLWQNMQLLFDCVN 258
Query: 418 EALQTH----GKDEQVNNLLGAEDIGKMICEQIC 329
EA++ + K + L+G +++GK+IC+QIC
Sbjct: 259 EAIEVYRRKNRKKQYAQELIGLKELGKIICDQIC 292
Score = 32.0 bits (71), Expect(2) = 1e-16
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = -1
Query: 251 CGNVTNITQLIRSSLCESVDEKNAFKAQTRKIGIDISNAILEEIVSEVSD 102
CG N + I + V++ + R+IGI+I +AIL EI+ EV D
Sbjct: 294 CGK-QNADEQINIDVTSIVEDGYYLQQLNRRIGIEIGDAILNEIIQEVID 342
>ref|XP_002313192.1| predicted protein [Populus trichocarpa] gi|222849600|gb|EEE87147.1|
predicted protein [Populus trichocarpa]
Length = 350
Score = 91.7 bits (226), Expect = 3e-16
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Frame = -2
Query: 778 DRALQCEYVEESKQHSPVSVLEELPSDEVSPFRKHIRWCSRTDKKEIPSVPNFIQPLRVT 599
D Q E +EE++Q SPVSVL ELPS K R+ + + K S + +
Sbjct: 153 DINFQWECMEENEQLSPVSVLNELPS-----INKVSRFLPKQEGKAA-SASSTVLSRNAE 206
Query: 598 DDLILSASLWDLLGNSSRNKHGSGGNRDIRKLTGTSSSSQYRKTKRVLEQTDQLLFDCVR 419
+D +LSA L DLL S KH G D++++ G + S Q+ K RVL Q QLLFDCV
Sbjct: 207 EDNMLSAFLCDLLVKSLIEKHSLAGFADLQEVVGPAFS-QHLKNNRVLRQNMQLLFDCVN 265
Query: 418 EALQT----HGKDEQVNNLLGAEDIGKMICEQICFW 323
EA++ H + + +++GK+ICEQIC W
Sbjct: 266 EAIEVHRRMHRRKQHAQEFKSLQELGKIICEQICSW 301