BLASTX nr result

ID: Coptis24_contig00028456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028456
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631969.1| PREDICTED: putative calcium-transporting ATP...   125   3e-27
ref|XP_002279593.1| PREDICTED: putative calcium-transporting ATP...   125   3e-27
ref|XP_002279629.1| PREDICTED: putative calcium-transporting ATP...   123   1e-26
ref|XP_002279818.1| PREDICTED: putative calcium-transporting ATP...   123   2e-26
emb|CBI26329.3| unnamed protein product [Vitis vinifera]              119   3e-25

>ref|XP_003631969.1| PREDICTED: putative calcium-transporting ATPase 13, plasma
           membrane-type-like [Vitis vinifera]
          Length = 1013

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/89 (65%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
 Frame = +2

Query: 5   RLNQLGGVKAVVKTLKTDSENGIHGEAEEISRRQTVFGSNTYEKPPAKGFFYFVWEAFQD 184
           +L +LGGV+ V   LKTD++NGIHG  E+++ RQ  FGSNTY +PP K FFYFV EAF+D
Sbjct: 92  QLRELGGVEGVADALKTDTKNGIHGAVEDVAERQETFGSNTYPRPPTKSFFYFVLEAFKD 151

Query: 185 MTIVILLVCATLSLGFGIKENG-ANGWYD 268
           +TI+ILL CATLSLGFGIKE+G   GWYD
Sbjct: 152 LTILILLACATLSLGFGIKEHGPKEGWYD 180


>ref|XP_002279593.1| PREDICTED: putative calcium-transporting ATPase 13, plasma
           membrane-type-like [Vitis vinifera]
          Length = 1011

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/89 (65%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
 Frame = +2

Query: 5   RLNQLGGVKAVVKTLKTDSENGIHGEAEEISRRQTVFGSNTYEKPPAKGFFYFVWEAFQD 184
           +L +LGGV+ V   LKTD++NGIHG  E+++ RQ  FGSNTY +PP K FFYFV EAF+D
Sbjct: 91  QLRELGGVEGVADALKTDTKNGIHGAVEDVAERQETFGSNTYPRPPTKSFFYFVLEAFKD 150

Query: 185 MTIVILLVCATLSLGFGIKENG-ANGWYD 268
           +TI+ILL CATLSLGFGIKE+G   GWYD
Sbjct: 151 LTILILLACATLSLGFGIKEHGLKEGWYD 179


>ref|XP_002279629.1| PREDICTED: putative calcium-transporting ATPase 13, plasma
           membrane-type-like [Vitis vinifera]
          Length = 1011

 Score =  123 bits (309), Expect = 1e-26
 Identities = 57/89 (64%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
 Frame = +2

Query: 5   RLNQLGGVKAVVKTLKTDSENGIHGEAEEISRRQTVFGSNTYEKPPAKGFFYFVWEAFQD 184
           +L +LGGV+ V   LKTD+++GIHG  E+++ RQ  FGSNTY +PP K FFYFV EAF+D
Sbjct: 91  QLRKLGGVEGVADALKTDTKSGIHGAVEDVAERQETFGSNTYPRPPTKSFFYFVLEAFKD 150

Query: 185 MTIVILLVCATLSLGFGIKENG-ANGWYD 268
           +TI+ILL CATLSLGFGIKE+G   GWYD
Sbjct: 151 LTILILLACATLSLGFGIKEHGPKEGWYD 179


>ref|XP_002279818.1| PREDICTED: putative calcium-transporting ATPase 13, plasma
           membrane-type-like [Vitis vinifera]
          Length = 1011

 Score =  123 bits (308), Expect = 2e-26
 Identities = 57/89 (64%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = +2

Query: 5   RLNQLGGVKAVVKTLKTDSENGIHGEAEEISRRQTVFGSNTYEKPPAKGFFYFVWEAFQD 184
           +L +LGGV+ V   LKT ++NGIHG  E+++ RQ  FGSNTY +PP K FFYFV EAF+D
Sbjct: 91  QLRELGGVEGVADALKTHTKNGIHGAVEDVAERQETFGSNTYPRPPTKSFFYFVLEAFKD 150

Query: 185 MTIVILLVCATLSLGFGIKENG-ANGWYD 268
           +TI+ILL CATLSLGFGIKE+G   GWYD
Sbjct: 151 LTILILLACATLSLGFGIKEHGLKEGWYD 179


>emb|CBI26329.3| unnamed protein product [Vitis vinifera]
          Length = 4083

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/82 (65%), Positives = 67/82 (81%)
 Frame = +2

Query: 5    RLNQLGGVKAVVKTLKTDSENGIHGEAEEISRRQTVFGSNTYEKPPAKGFFYFVWEAFQD 184
            +L +LGGV+ V   LKTD++NGIHG  E+++ RQ  FGSNTY +PP K FFYFV EAF+D
Sbjct: 3319 QLRELGGVEGVADALKTDTKNGIHGAVEDVAERQETFGSNTYPRPPTKSFFYFVLEAFKD 3378

Query: 185  MTIVILLVCATLSLGFGIKENG 250
            +TI+ILL CATLSLGFGIKE+G
Sbjct: 3379 LTILILLACATLSLGFGIKEHG 3400



 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/88 (59%), Positives = 68/88 (77%), Gaps = 1/88 (1%)
 Frame = +2

Query: 8    LNQLGGVKAVVKTLKTDSENGIHGEAEEISRRQTVFGSNTYEKPPAKGFFYFVWEAFQDM 187
            L + GGV++V   L+TD +NGI G  ++++ RQ  FGSNTY++PPAK  F+FV EAF+D+
Sbjct: 1577 LLEFGGVESVADALETDIKNGISGAVDDVALRQEAFGSNTYKRPPAKSLFHFVVEAFKDL 1636

Query: 188  TIVILLVCATLSLGFGIKENG-ANGWYD 268
            T+ ILL CATLSLGFGIKE+G   GWYD
Sbjct: 1637 TVFILLFCATLSLGFGIKEHGLKEGWYD 1664



 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/88 (59%), Positives = 67/88 (76%), Gaps = 1/88 (1%)
 Frame = +2

Query: 8   LNQLGGVKAVVKTLKTDSENGIHGEAEEISRRQTVFGSNTYEKPPAKGFFYFVWEAFQDM 187
           L + GGV+ V   L+TD +NGI G  ++++ RQ  FGSNTY++PPAK  F+FV EAF+D+
Sbjct: 92  LLESGGVEGVADALETDIKNGISGAVDDVALRQEAFGSNTYKRPPAKSLFHFVVEAFKDV 151

Query: 188 TIVILLVCATLSLGFGIKENG-ANGWYD 268
           TI+ILL CA LSLGFGIKE+G   GWYD
Sbjct: 152 TILILLFCAALSLGFGIKEHGLKEGWYD 179



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = +2

Query: 5    RLNQLGGVKAVVKTLKTDSENGIHGEAEEISRRQTVFGSNTYEKPPAKGFFYF 163
            +L +LGGV+ V   LKT ++NGIHG  E+++ RQ  FGSNTY +PP K FFYF
Sbjct: 2531 QLRELGGVEGVADALKTHTKNGIHGAVEDVAERQETFGSNTYPRPPTKSFFYF 2583



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 25/52 (48%), Positives = 36/52 (69%)
 Frame = +2

Query: 8    LNQLGGVKAVVKTLKTDSENGIHGEAEEISRRQTVFGSNTYEKPPAKGFFYF 163
            L + GGV+ V   L+TD +NGI G  ++++ RQ  FGSNTY++PP K  F+F
Sbjct: 943  LLESGGVEGVADALETDIKNGISGAVDDVALRQEAFGSNTYKRPPTKSLFHF 994


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