BLASTX nr result

ID: Coptis24_contig00028433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028433
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42260.1| zinc finger protein [Beta vulgaris]                     77   2e-12
ref|XP_002282016.2| PREDICTED: uncharacterized protein LOC100262...    67   2e-09
emb|CBI20954.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_004162068.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    64   1e-08
ref|XP_004136461.1| PREDICTED: uncharacterized protein LOC101214...    64   1e-08

>gb|AEV42260.1| zinc finger protein [Beta vulgaris]
          Length = 2627

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/62 (59%), Positives = 48/62 (77%)
 Frame = -1

Query: 300 NKEISLLTKVTTNHLFLTQFEAFRASLLTLHKRGNPKLALSILQTVVSLGGKINNLVFSD 121
           +K+  LL+KV  NHLFLTQFEAFRA++L+L  R NP LALS+LQT+V  GG  NN ++S 
Sbjct: 13  DKDTQLLSKVAANHLFLTQFEAFRATILSLRHR-NPNLALSLLQTIVVNGGNFNNFIYST 71

Query: 120 SC 115
           +C
Sbjct: 72  NC 73


>ref|XP_002282016.2| PREDICTED: uncharacterized protein LOC100262933 [Vitis vinifera]
          Length = 2871

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/62 (53%), Positives = 47/62 (75%)
 Frame = -1

Query: 300 NKEISLLTKVTTNHLFLTQFEAFRASLLTLHKRGNPKLALSILQTVVSLGGKINNLVFSD 121
           +KE  LL+++  NHLFL QFE FRA+LLTL  R NP LA +ILQT+V+ G + +++++S 
Sbjct: 2   DKESQLLSRLAVNHLFLAQFEPFRAALLTLQIR-NPSLARAILQTIVAHGARFDSILWSQ 60

Query: 120 SC 115
           SC
Sbjct: 61  SC 62


>emb|CBI20954.3| unnamed protein product [Vitis vinifera]
          Length = 2483

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/62 (53%), Positives = 47/62 (75%)
 Frame = -1

Query: 300 NKEISLLTKVTTNHLFLTQFEAFRASLLTLHKRGNPKLALSILQTVVSLGGKINNLVFSD 121
           +KE  LL+++  NHLFL QFE FRA+LLTL  R NP LA +ILQT+V+ G + +++++S 
Sbjct: 2   DKESQLLSRLAVNHLFLAQFEPFRAALLTLQIR-NPSLARAILQTIVAHGARFDSILWSQ 60

Query: 120 SC 115
           SC
Sbjct: 61  SC 62


>ref|XP_004162068.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229526 [Cucumis sativus]
          Length = 2542

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 45/62 (72%)
 Frame = -1

Query: 300 NKEISLLTKVTTNHLFLTQFEAFRASLLTLHKRGNPKLALSILQTVVSLGGKINNLVFSD 121
           +KE  +L+++  NHL+L QFE  RA ++ L  R NP+LALSILQT+VS  G+ +N+ +S 
Sbjct: 3   DKETEILSRLAANHLYLAQFEPLRAIIVALRVR-NPELALSILQTIVSQSGRFDNVTWSP 61

Query: 120 SC 115
           SC
Sbjct: 62  SC 63


>ref|XP_004136461.1| PREDICTED: uncharacterized protein LOC101214937 [Cucumis sativus]
          Length = 2542

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/62 (50%), Positives = 45/62 (72%)
 Frame = -1

Query: 300 NKEISLLTKVTTNHLFLTQFEAFRASLLTLHKRGNPKLALSILQTVVSLGGKINNLVFSD 121
           +KE  +L+++  NHL+L QFE  RA ++ L  R NP+LALSILQT+VS  G+ +N+ +S 
Sbjct: 3   DKETEILSRLAANHLYLAQFEPLRAIIVALRVR-NPELALSILQTIVSQSGRFDNVTWSP 61

Query: 120 SC 115
           SC
Sbjct: 62  SC 63


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