BLASTX nr result

ID: Coptis24_contig00028428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028428
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276231.1| PREDICTED: zinc transporter 6, chloroplastic...   296   3e-78
ref|XP_003539350.1| PREDICTED: zinc transporter 6, chloroplastic...   287   2e-75
ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222...   283   3e-74
ref|XP_003551243.1| PREDICTED: zinc transporter 6, chloroplastic...   277   2e-72
ref|XP_002299993.1| ZIP transporter [Populus trichocarpa] gi|222...   275   1e-71

>ref|XP_002276231.1| PREDICTED: zinc transporter 6, chloroplastic [Vitis vinifera]
           gi|297745865|emb|CBI15921.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score =  296 bits (759), Expect = 3e-78
 Identities = 153/232 (65%), Positives = 179/232 (77%), Gaps = 8/232 (3%)
 Frame = -3

Query: 673 MTHCVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPVMLARKFQGKPTFEKVTL 494
           M  CV +  +   CR+ +AA HLKL+SI VIFITSV GISSPVMLAR FQGKP ++K  L
Sbjct: 1   MASCVGDTARALACRDGRAAAHLKLVSIFVIFITSVVGISSPVMLARVFQGKPMYDKAIL 60

Query: 493 VIKCFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVT 314
           +IKCFAAGVIL+TS VHVLPDAF ALSDC VAS HPWKDFPF+GL +M+G     LVD+T
Sbjct: 61  IIKCFAAGVILSTSLVHVLPDAFAALSDCHVASHHPWKDFPFSGLVTMIGAILALLVDLT 120

Query: 313 ATSHVEHKKTSHYTPVGTLDEL--------DKKXXXXXXXXSCDDGKSVEDLIMMKQKLV 158
           A++HV+  K SHYTP+GT +EL        + +        SC D K  E+L+ +KQ+LV
Sbjct: 121 ASAHVDSHKPSHYTPIGTQEELPTHAKKLTEFRVETAVLSVSCPD-KQGEELVKLKQRLV 179

Query: 157 SQVLEIGIIFHSVIIGVTLGMSQNQCTIRPLVVALAFHQIFEGMGLGGCIAQ 2
           SQVLEIGIIFHSVIIGVT+GMSQNQCTIRPLV ALAFHQIFEG+GLGGCIAQ
Sbjct: 180 SQVLEIGIIFHSVIIGVTMGMSQNQCTIRPLVAALAFHQIFEGLGLGGCIAQ 231


>ref|XP_003539350.1| PREDICTED: zinc transporter 6, chloroplastic-like [Glycine max]
          Length = 394

 Score =  287 bits (734), Expect = 2e-75
 Identities = 153/242 (63%), Positives = 180/242 (74%), Gaps = 6/242 (2%)
 Frame = -3

Query: 709 ILIFPTLTSFV-----TMTHCVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPV 545
           I ++ TL+ F       M  CVT+L Q + CRNS AATHLK+ISI  IF+TSV G+S+PV
Sbjct: 52  ISLYTTLSQFQLLFVHNMAECVTDLAQAAACRNSAAATHLKVISICTIFVTSVMGVSTPV 111

Query: 544 MLARKFQGKPTFEKVTLVIKCFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFT 365
           MLAR FQGK  ++   L+IKCFAAGVILATS VHVLPDAF ALSDCQVAS HPWKDFPF 
Sbjct: 112 MLARYFQGKSLYDIAILLIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFA 171

Query: 364 GLGSMVGXXXXXLVDVTATSHVEHKKTSHYTPVGTLD-ELDKKXXXXXXXXSCDDGKSVE 188
           GL +++G     LVD  A+SH+EH    HYTPV TL+ E               + + VE
Sbjct: 172 GLVTLIGVLMALLVDTVASSHMEH---GHYTPVETLEKEGGSSAWSIELAGGGGEVQRVE 228

Query: 187 DLIMMKQKLVSQVLEIGIIFHSVIIGVTLGMSQNQCTIRPLVVALAFHQIFEGMGLGGCI 8
           +L+ +KQ+LVSQVLEIGIIFHSVIIGVT+GMSQN CTIRPLVVAL+FHQIFEG+GLGGCI
Sbjct: 229 ELMRLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVVALSFHQIFEGLGLGGCI 288

Query: 7   AQ 2
           AQ
Sbjct: 289 AQ 290


>ref|XP_002313244.1| ZIP transporter [Populus trichocarpa] gi|222849652|gb|EEE87199.1|
           ZIP transporter [Populus trichocarpa]
          Length = 335

 Score =  283 bits (724), Expect = 3e-74
 Identities = 148/229 (64%), Positives = 175/229 (76%), Gaps = 8/229 (3%)
 Frame = -3

Query: 664 CVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPVMLARKFQGKPTFEKVTLVIK 485
           C+ + T+ +TCR++QAATHLKLISIL+IF TS+ GIS PV+LAR FQGKP ++K TL+IK
Sbjct: 5   CLIDATRSTTCRDTQAATHLKLISILIIFFTSIIGISFPVLLARYFQGKPVYDKATLIIK 64

Query: 484 CFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTATS 305
           CFAAGVIL+TS VHVLPDAF ALSDC VAS HPWKDFPF GL +++G     LVD+TA++
Sbjct: 65  CFAAGVILSTSLVHVLPDAFGALSDCHVASKHPWKDFPFAGLITLIGVLLALLVDLTASA 124

Query: 304 HVEHKKTSH--------YTPVGTLDELDKKXXXXXXXXSCDDGKSVEDLIMMKQKLVSQV 149
           HVE     H        YT VGT +E+  K            G+   DL+ +KQ+LVSQV
Sbjct: 125 HVEQHGQGHGDGDGDGEYTVVGTQEEMVGKKVSDMSVRVEIMGE--VDLVKVKQRLVSQV 182

Query: 148 LEIGIIFHSVIIGVTLGMSQNQCTIRPLVVALAFHQIFEGMGLGGCIAQ 2
           LEIGIIFHSVIIGVT+GMSQN+CTIRPLV ALAFHQIFEGMGLGGCIAQ
Sbjct: 183 LEIGIIFHSVIIGVTMGMSQNKCTIRPLVAALAFHQIFEGMGLGGCIAQ 231


>ref|XP_003551243.1| PREDICTED: zinc transporter 6, chloroplastic-like [Glycine max]
          Length = 328

 Score =  277 bits (708), Expect = 2e-72
 Identities = 144/227 (63%), Positives = 170/227 (74%), Gaps = 3/227 (1%)
 Frame = -3

Query: 673 MTHCVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPVMLARKFQGKPTFEKVTL 494
           MT C+T+L Q + CRN   A HLK+ISI +IF+TSVTG+ +PV LAR FQGK  +    L
Sbjct: 1   MTECMTDLAQAAACRNGTTAAHLKVISIFMIFVTSVTGVCAPVTLARYFQGKSLYNIAIL 60

Query: 493 VIKCFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVT 314
           +IKCFAAGVILATS VHVLPDAF ALSDCQVAS HPWKDFPF GL +++G     LVD  
Sbjct: 61  LIKCFAAGVILATSLVHVLPDAFAALSDCQVASQHPWKDFPFAGLVTLIGVLMALLVDTV 120

Query: 313 ATSHVEHKKTSHYTPVGTLDELDKKXXXXXXXXSCDDG---KSVEDLIMMKQKLVSQVLE 143
           A+SH+EH   +HYTPV T ++                G   + VE+L+ +KQ+LVSQVLE
Sbjct: 121 ASSHMEH---AHYTPVETQEKEGGGGGSTWSIELVGGGAEVQRVEELMRLKQRLVSQVLE 177

Query: 142 IGIIFHSVIIGVTLGMSQNQCTIRPLVVALAFHQIFEGMGLGGCIAQ 2
           IGIIFHSVIIGVT+GMSQN CTIRPLVVAL+FHQIFEG+GLGGCIAQ
Sbjct: 178 IGIIFHSVIIGVTMGMSQNVCTIRPLVVALSFHQIFEGLGLGGCIAQ 224


>ref|XP_002299993.1| ZIP transporter [Populus trichocarpa] gi|222847251|gb|EEE84798.1|
           ZIP transporter [Populus trichocarpa]
          Length = 337

 Score =  275 bits (702), Expect = 1e-71
 Identities = 145/238 (60%), Positives = 175/238 (73%), Gaps = 17/238 (7%)
 Frame = -3

Query: 664 CVTNLTQESTCRNSQAATHLKLISILVIFITSVTGISSPVMLARKFQGKPTFEKVTLVIK 485
           C+ + T+ +TCR++QAATHLKLISI++IF TS+ GISSPV+LAR F GK  ++K+TL+IK
Sbjct: 5   CLIDATRSATCRDTQAATHLKLISIVIIFFTSIIGISSPVLLARYFHGKALYDKITLIIK 64

Query: 484 CFAAGVILATSFVHVLPDAFDALSDCQVASFHPWKDFPFTGLGSMVGXXXXXLVDVTATS 305
           CFAAGVIL+TS VHVLPDA+DALSDC VAS HPWKDFPF G  +++G     LVD+ A+S
Sbjct: 65  CFAAGVILSTSLVHVLPDAYDALSDCHVASKHPWKDFPFAGFVTLIGVLLALLVDLAASS 124

Query: 304 HVEHKKTSH----------YTPVGTLDELDKKXXXXXXXXSCDDGKSVE-------DLIM 176
            +E     H          YT VG  DE+  K          +  KSV+       DL+ 
Sbjct: 125 RLEQHGHGHGHGNGNGNGQYTVVGIQDEIVGKK---------ESDKSVKVEIMGEVDLVK 175

Query: 175 MKQKLVSQVLEIGIIFHSVIIGVTLGMSQNQCTIRPLVVALAFHQIFEGMGLGGCIAQ 2
           +KQ+LVSQVLEIGIIFHSVIIGVT+GMSQN+CTIRPLV ALAFHQIFEGMGLGGCIAQ
Sbjct: 176 VKQRLVSQVLEIGIIFHSVIIGVTMGMSQNKCTIRPLVTALAFHQIFEGMGLGGCIAQ 233


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