BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028427
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...   123   1e-26
ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    95   6e-18
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    95   6e-18

>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
 Frame = +1

Query: 40   WNVRGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYSRDP 219
            WNVRG N+  K KEI    ++ K     L+ET+++ DK   + +M   +W  +NNY    
Sbjct: 523  WNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYDSAA 582

Query: 220  SGRIWICWDPSILQFVKIIESDQYIHCKVTVIHYNEVFFFTVVYARNAKVERLKLWQDI- 396
            +GRIW+ W+P++L    I  S Q IHC+V  +  +E F F  VYA N   +R +LW  I 
Sbjct: 583  NGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKELWNFIA 642

Query: 397  -RTIQNSINLPWNVVGDFNNITKAEERMGGAPMHPREASDFTDC 525
              + QNS NL   + GDFNN+   ++R  G P+   E  DF+DC
Sbjct: 643  HTSAQNSRNL--LIGGDFNNVLLVDDRRNGNPVTQHEIQDFSDC 684


>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
 Frame = +1

Query: 40  WNVRGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYSRDP 219
           WN+RG N+  K  E+ ++  Q++++ F L+ET+V+    + +  +    W  + NY    
Sbjct: 6   WNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVSQLLLRSWSFLYNYDFSC 65

Query: 220 SGRIWICWDPSILQFVKIIESDQYIHCKVTVIHYNEVFFFTVVYARNAKVERLKLWQDIR 399
            GRIW+CW+   ++      SDQ IH  VT++  N  F  +++Y  N    R  LW DI 
Sbjct: 66  RGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIV 125

Query: 400 TIQNS-INLPWNVVGDFNNITKAEERMGGA 486
           +  +   + PW ++GDFN I    +++GG+
Sbjct: 126 SRSDGWESTPWILMGDFNAIRNQSDKLGGS 155


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
 Frame = +1

Query: 40   WNVRGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYSRDP 219
            WN+RG N+  K  E+ ++  Q++++ F L+ET+V+      +  +    W  + NY    
Sbjct: 811  WNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKYNVTQLLLRSWSFLYNYDFSC 870

Query: 220  SGRIWICWDPSILQFVKIIESDQYIHCKVTVIHYNEVFFFTVVYARNAKVERLKLWQDIR 399
             GRIW+CW+   ++      SDQ IH  VT++  N  F  +++Y  N    R  LW DI 
Sbjct: 871  RGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIV 930

Query: 400  TIQNS-INLPWNVVGDFNNITKAEERMGGA 486
            +  +   + PW ++GDFN I    +R+GG+
Sbjct: 931  SRSDGWESTPWILMGDFNAIRNQSDRLGGS 960



 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 1/147 (0%)
 Frame = +1

Query: 49  RGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYSRDPSGR 228
           RG N+  K  E+ ++  Q++++ F L+ET+V+    + +  +    W  + NY     GR
Sbjct: 533 RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGR 592

Query: 229 IWICWDPSILQFVKIIESDQYIHCKVTVIHYNEVFFFTVVYARNAKVERLKLWQDIRTIQ 408
           IW+CW+   ++      SDQ IH  VT++  N  F  +++Y  N    R  LW DI +  
Sbjct: 593 IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 652

Query: 409 NS-INLPWNVVGDFNNITKAEERMGGA 486
           +   + PW ++GDFN I    +R+GG+
Sbjct: 653 DGWESTPWILMGDFNAIRNQSDRLGGS 679


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 50/150 (33%), Positives = 80/150 (53%)
 Frame = +1

Query: 64  VQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYSRDPSGRIWICW 243
           + K KEI+   ++ + +   L+ET+V+    + +R+       +++NY    +GR+WI W
Sbjct: 354 IGKLKEISSRLLKLRPTIAILIETRVKNKNAKKIRDKLKLPHNYLDNYKWHDNGRLWIEW 413

Query: 244 DPSILQFVKIIESDQYIHCKVTVIHYNEVFFFTVVYARNAKVERLKLWQDIRTIQNSINL 423
           D S +    +  S QY+H  V  +     F+ T VYA N    R  LW+D+  I      
Sbjct: 414 DNSKIDVRHVKCSSQYVHVGVYNLQGEFKFWLTAVYALNQLDRRKVLWKDLEAIHKHQQG 473

Query: 424 PWNVVGDFNNITKAEERMGGAPMHPREASD 513
           PW V+GDFNN+TKA++R+GG  +   E  D
Sbjct: 474 PWCVIGDFNNVTKAQDRIGGKAVTESEYID 503


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 95.1 bits (235), Expect = 6e-18
 Identities = 50/147 (34%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
 Frame = +1

Query: 40  WNVRGTNEVQKAKEINKMRIQKKLSAFCLLETKVRQDKCELMRNMCCPQWEHMNNYSRDP 219
           WN+RG N   + + +        L   C LET V Q+    +     P W   +NY    
Sbjct: 6   WNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSNYCCSE 65

Query: 220 SGRIWICWDPSILQFVKIIESDQYIHCKVTVIHYNEVFFFTVVYARNAKVERLKLWQDIR 399
            GRIWI WDPSI   V    +DQ + C + +    + F    VY RN++++R  LW+DI 
Sbjct: 66  LGRIWIVWDPSISVLV-FKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDIL 124

Query: 400 TIQNSINL---PWNVVGDFNNITKAEE 471
            +  +  L   PW ++GDFN I  A E
Sbjct: 125 VLSRTSPLSVTPWLLLGDFNQIAAASE 151