BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028400
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302301.1| methyl binding domain protein [Populus trich...    54   1e-09
ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248...    67   2e-09
emb|CBI19167.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_004152635.1| PREDICTED: methyl-CpG-binding domain-contain...    67   4e-09
ref|XP_004152634.1| PREDICTED: methyl-CpG-binding domain-contain...    67   4e-09

>ref|XP_002302301.1| methyl binding domain protein [Populus trichocarpa]
           gi|222844027|gb|EEE81574.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 1276

 Score = 54.3 bits (129), Expect(2) = 1e-09
 Identities = 32/55 (58%), Positives = 38/55 (69%)
 Frame = -1

Query: 632 DIVIPKIDRSVFNESAGSRKQTYSRLRLAAPRKPDISTVGRGRYNNNNNATQQVP 468
           D+  PKIDRSVFNESAGSRKQT+SRLRL APR  + S         ++N+T  VP
Sbjct: 54  DVSTPKIDRSVFNESAGSRKQTFSRLRL-APRNNNASP--------SSNSTPVVP 99



 Score = 34.3 bits (77), Expect(2) = 1e-09
 Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 38/157 (24%)
 Frame = -2

Query: 358 PERKENKEIVAVLRGLFGKDNTDIKFKESKVLSQELATVPLVVG---RLEEPREIVSINX 188
           P  +EN +I+++L+ LFG D+  I+ K       +L ++P++     RL       S N 
Sbjct: 107 PLDEENSQIISLLKSLFGSDSNSIENKNEHY--HKLVSIPVIYNDYMRLPSTNNAESQNV 164

Query: 187 XXXXXXXXXXXXXXXXRSNKVR-RVAES-----------------------EDFYENVTI 80
                            ++ +  R AES                        +  EN TI
Sbjct: 165 SIDIWDSSQGGLKRLEVNHSISIRTAESSSKKRKRGRPRKNENVNFDNNDNSELVENKTI 224

Query: 79  N---ENVVME--------IVNRNGVVVDLAVLGSSVD 2
               +NV +E        +VN+NGVVVD   LG+  D
Sbjct: 225 AVVCDNVEVESKKKEEMVMVNKNGVVVDFGALGNMED 261


>ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248904 [Vitis vinifera]
          Length = 947

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = -1

Query: 635 NDIVIPKIDRSVFNESAGSRKQTYSRLRLAAPRKPDIS 522
           +D+VIPKIDRS+FNESAGSRKQTYSRLRL APRKPDI+
Sbjct: 47  DDVVIPKIDRSIFNESAGSRKQTYSRLRL-APRKPDIA 83


>emb|CBI19167.3| unnamed protein product [Vitis vinifera]
          Length = 1129

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = -1

Query: 635 NDIVIPKIDRSVFNESAGSRKQTYSRLRLAAPRKPDIS 522
           +D+VIPKIDRS+FNESAGSRKQTYSRLRL APRKPDI+
Sbjct: 49  DDVVIPKIDRSIFNESAGSRKQTYSRLRL-APRKPDIA 85


>ref|XP_004152635.1| PREDICTED: methyl-CpG-binding domain-containing protein 8-like
           isoform 2 [Cucumis sativus]
           gi|449503925|ref|XP_004162229.1| PREDICTED:
           methyl-CpG-binding domain-containing protein 8-like
           isoform 2 [Cucumis sativus]
          Length = 222

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
 Frame = -1

Query: 656 SSSNTCNN--DIVIPKIDRSVFNESAGSRKQTYSRLRLAAPRKPDIST 519
           SS++  NN  D++IPKIDRSVFNESAGSRKQTYSRLRL APRKP  S+
Sbjct: 46  SSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRL-APRKPQFSS 92


>ref|XP_004152634.1| PREDICTED: methyl-CpG-binding domain-containing protein 8-like
           isoform 1 [Cucumis sativus]
           gi|449503923|ref|XP_004162228.1| PREDICTED:
           methyl-CpG-binding domain-containing protein 8-like
           isoform 1 [Cucumis sativus]
          Length = 235

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
 Frame = -1

Query: 656 SSSNTCNN--DIVIPKIDRSVFNESAGSRKQTYSRLRLAAPRKPDIST 519
           SS++  NN  D++IPKIDRSVFNESAGSRKQTYSRLRL APRKP  S+
Sbjct: 46  SSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRL-APRKPQFSS 92