BLASTX nr result

ID: Coptis24_contig00028398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028398
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778...   164   7e-39
ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261...   164   9e-39
emb|CBI26899.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002311502.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_004164119.1| PREDICTED: uridine-cytidine kinase C-like [C...   158   4e-37

>ref|XP_003528540.1| PREDICTED: uncharacterized protein LOC100778905 [Glycine max]
          Length = 945

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/102 (77%), Positives = 92/102 (90%)
 Frame = -2

Query: 308 SGSGKTSLSEKVASVIGCEVISMENYRDGLDDGNDLDSIDFDTLVRNLEDLMKGKDAVMP 129
           SGSGKTSL+EKVASVIGC VISMENYRDG+D+GND+DSIDFDTL++NLEDL KG D  +P
Sbjct: 71  SGSGKTSLTEKVASVIGCTVISMENYRDGVDEGNDVDSIDFDTLIKNLEDLTKGNDTSIP 130

Query: 128 LFDFQEKRRVGSKTLKSTTGVVVVDGTYALHSKLRSLLDIRV 3
            FD+Q+KRRVG K +KS + VV+VDGTYALH+KLRSLLDIRV
Sbjct: 131 EFDYQQKRRVGYKAIKSPSSVVIVDGTYALHAKLRSLLDIRV 172



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/104 (40%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
 Frame = -2

Query: 308 SGSGKTSLSEKVASVIGCEVISMENYRDGLDD--GNDLDSIDFDTLVRNLEDLMKGKDAV 135
           SGSGKTSL+ K+A++IGCEV+S+E+Y   + D   +D  ++D   L +N++D+  G+   
Sbjct: 523 SGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFSALDLSLLSKNIDDIRNGQRTK 582

Query: 134 MPLFDFQEKRRVGSKTLK--STTGVVVVDGTYALHSKLRSLLDI 9
           +P+FD +   R G K L+     GV++ +G YALH  +R  LD+
Sbjct: 583 VPIFDLESGARSGFKELEVSEDCGVIIFEGIYALHPDIRISLDL 626


>ref|XP_002280757.2| PREDICTED: uncharacterized protein LOC100261233 [Vitis vinifera]
          Length = 951

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/103 (77%), Positives = 96/103 (93%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 SGSGKTSLSEKVASVIGCEVISMENYRDGLDDGNDLDSIDFDTLVRNLEDLMKGKDAVMP 129
           SGSGK+SL+EKVASVIGC V+SMENYRDG+DDGNDL+SIDFD LV NLEDL++GKD ++P
Sbjct: 71  SGSGKSSLAEKVASVIGCTVVSMENYRDGVDDGNDLNSIDFDALVSNLEDLIRGKDTLIP 130

Query: 128 LFDFQEKRRVGSKTLKS-TTGVVVVDGTYALHSKLRSLLDIRV 3
           +FDFQEKRRV S+ +KS ++GVV+VDGTYALHS+LRSLLDIRV
Sbjct: 131 VFDFQEKRRVDSRAIKSASSGVVIVDGTYALHSRLRSLLDIRV 173



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/106 (39%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
 Frame = -2

Query: 308 SGSGKTSLSEKVASVIGCEVISMENY--RDGLDD--GNDLDSIDFDTLVRNLEDLMKGKD 141
           SGSGKTSL+ K+A+++GCEV+S+E+Y   + + D   +D  S+D   L +N++D+   + 
Sbjct: 528 SGSGKTSLAHKMANIVGCEVVSLESYYKSEHVKDFKCDDFSSLDLSLLSKNIDDVKNCRR 587

Query: 140 AVMPLFDFQEKRRVGSKTLK--STTGVVVVDGTYALHSKLRSLLDI 9
             +P+FD +   R G K L+     GVV+ +G YALH ++R  LD+
Sbjct: 588 TKVPIFDLETGARSGFKELEVSEDCGVVIFEGVYALHPEIRKSLDL 633


>emb|CBI26899.3| unnamed protein product [Vitis vinifera]
          Length = 981

 Score =  164 bits (414), Expect = 9e-39
 Identities = 80/103 (77%), Positives = 96/103 (93%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 SGSGKTSLSEKVASVIGCEVISMENYRDGLDDGNDLDSIDFDTLVRNLEDLMKGKDAVMP 129
           SGSGK+SL+EKVASVIGC V+SMENYRDG+DDGNDL+SIDFD LV NLEDL++GKD ++P
Sbjct: 71  SGSGKSSLAEKVASVIGCTVVSMENYRDGVDDGNDLNSIDFDALVSNLEDLIRGKDTLIP 130

Query: 128 LFDFQEKRRVGSKTLKS-TTGVVVVDGTYALHSKLRSLLDIRV 3
           +FDFQEKRRV S+ +KS ++GVV+VDGTYALHS+LRSLLDIRV
Sbjct: 131 VFDFQEKRRVDSRAIKSASSGVVIVDGTYALHSRLRSLLDIRV 173



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/106 (39%), Positives = 68/106 (64%), Gaps = 6/106 (5%)
 Frame = -2

Query: 308 SGSGKTSLSEKVASVIGCEVISMENY--RDGLDD--GNDLDSIDFDTLVRNLEDLMKGKD 141
           SGSGKTSL+ K+A+++GCEV+S+E+Y   + + D   +D  S+D   L +N++D+   + 
Sbjct: 555 SGSGKTSLAHKMANIVGCEVVSLESYYKSEHVKDFKCDDFSSLDLSLLSKNIDDVKNCRR 614

Query: 140 AVMPLFDFQEKRRVGSKTLK--STTGVVVVDGTYALHSKLRSLLDI 9
             +P+FD +   R G K L+     GVV+ +G YALH ++R  LD+
Sbjct: 615 TKVPIFDLETGARSGFKELEVSEDCGVVIFEGVYALHPEIRKSLDL 660


>ref|XP_002311502.1| predicted protein [Populus trichocarpa] gi|222851322|gb|EEE88869.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  161 bits (407), Expect = 6e-38
 Identities = 79/103 (76%), Positives = 96/103 (93%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 SGSGKTSLSEKVASVIGCEVISMENYRDGLDDGNDLDSIDFDTLVRNLEDLMKGKDAVMP 129
           SGSGKTSL+EKVASVIGC+VISMENYR G+DD +DLDSIDFD LV+NLEDL KGKD ++P
Sbjct: 75  SGSGKTSLAEKVASVIGCDVISMENYRTGVDDVSDLDSIDFDALVQNLEDLTKGKDTLIP 134

Query: 128 LFDFQEKRRVGSKTLKS-TTGVVVVDGTYALHSKLRSLLDIRV 3
           +FD+Q+KRR+GSK +KS ++GVV+VDGTYALH++LRSLLDIRV
Sbjct: 135 VFDYQQKRRIGSKGIKSISSGVVIVDGTYALHARLRSLLDIRV 177


>ref|XP_004164119.1| PREDICTED: uridine-cytidine kinase C-like [Cucumis sativus]
          Length = 407

 Score =  158 bits (400), Expect = 4e-37
 Identities = 77/103 (74%), Positives = 93/103 (90%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 SGSGKTSLSEKVASVIGCEVISMENYRDGLDDGNDLDSIDFDTLVRNLEDLMKGKDAVMP 129
           SGSGKTSL+EKVASVIGC V+SMENYRDG+D+GNDLDSIDFD LV+NLEDL  G+D ++P
Sbjct: 70  SGSGKTSLAEKVASVIGCNVVSMENYRDGVDEGNDLDSIDFDLLVQNLEDLTNGRDTMIP 129

Query: 128 LFDFQEKRRVGSKTLKS-TTGVVVVDGTYALHSKLRSLLDIRV 3
           +FDF  K+RV SK +KS ++GVV++DGTYALH+KLRSLLDIRV
Sbjct: 130 VFDFHLKKRVSSKIIKSASSGVVIIDGTYALHAKLRSLLDIRV 172


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