BLASTX nr result

ID: Coptis24_contig00028324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028324
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265591.2| PREDICTED: NAC domain-containing protein 42-...    99   4e-19
ref|XP_002513398.1| NAC domain-containing protein, putative [Ric...    99   4e-19
ref|XP_002265956.2| PREDICTED: NAC domain-containing protein 42 ...    97   1e-18
emb|CBI21757.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CAN72060.1| hypothetical protein VITISV_037482 [Vitis vinifera]    97   1e-18

>ref|XP_002265591.2| PREDICTED: NAC domain-containing protein 42-like [Vitis vinifera]
           gi|296082747|emb|CBI21752.3| unnamed protein product
           [Vitis vinifera]
          Length = 295

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/103 (51%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
 Frame = -2

Query: 338 TDWMMHEFRLPATVKSTNCNLPSPKNNTLEAEIWTLCRIFKRNASYRKYAPAWRETPIKQ 159
           TDWMMHEFRLPA  K  N  LP+ K    EAE+WTLCRIFKRN  +R+Y P WRE P K+
Sbjct: 134 TDWMMHEFRLPADQK--NATLPTAKAADQEAEVWTLCRIFKRNVPHRRYTPDWREVPAKR 191

Query: 158 NPSDSNSQTNSLESVNRD--KSFGAPVVQQKQSNKQFLSHTEE 36
           NP++S  +T  +   N +   S GAPV   K   K   SH +E
Sbjct: 192 NPTNSKPETCDMSPENWEGYVSSGAPVSLHK-GKKPVGSHIDE 233


>ref|XP_002513398.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223547306|gb|EEF48801.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 299

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/116 (47%), Positives = 73/116 (62%), Gaps = 4/116 (3%)
 Frame = -2

Query: 338 TDWMMHEFRLPATVKSTNCNLPSPKNNTLEAEIWTLCRIFKRNASYRKYAPAWRETPIKQ 159
           TDWMMHEFRLP    +TN +  + K +  EAE+WTLCRIFKRN S+RKY   WRE   K 
Sbjct: 140 TDWMMHEFRLPTNDSNTN-SPANAKTSAPEAEVWTLCRIFKRNVSHRKYTADWRELSTKH 198

Query: 158 NPS-DSNSQTNSLESVNRDK--SFGAPVVQQKQSNKQFLSHTEERVHMF-PDQLGS 3
            P+ D++S+T S++S +R+   SFG P +Q  +  K   +H  ER   +  DQL S
Sbjct: 199 QPAIDTSSKTCSVDSNSRENYLSFGDPAIQYSE-KKPVFNHVNERKQFYHADQLSS 253


>ref|XP_002265956.2| PREDICTED: NAC domain-containing protein 42 [Vitis vinifera]
          Length = 279

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
 Frame = -2

Query: 338 TDWMMHEFRLPATVKSTNCNLPSPKNNTLEAEIWTLCRIFKRNASYRKYAPAWRETPIKQ 159
           TDWMMHEFRLPA  K+TN  LP+ K    EAEIWTLCRIFKR+ SYRKY P WRE+  + 
Sbjct: 132 TDWMMHEFRLPANQKNTN--LPNAKAADQEAEIWTLCRIFKRDVSYRKYTPDWRESSARH 189

Query: 158 NPSDSNSQTNSLESVNRDK---SFGA 90
           NP ++ ++T   +S N +    SFGA
Sbjct: 190 NPVNARTKTCDADSENLEYYNISFGA 215


>emb|CBI21757.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
 Frame = -2

Query: 338 TDWMMHEFRLPATVKSTNCNLPSPKNNTLEAEIWTLCRIFKRNASYRKYAPAWRETPIKQ 159
           TDWMMHEFRLPA  K+TN  LP+ K    EAEIWTLCRIFKR+ SYRKY P WRE+  + 
Sbjct: 137 TDWMMHEFRLPANQKNTN--LPNAKAADQEAEIWTLCRIFKRDVSYRKYTPDWRESSARH 194

Query: 158 NPSDSNSQTNSLESVNRDK---SFGA 90
           NP ++ ++T   +S N +    SFGA
Sbjct: 195 NPVNARTKTCDADSENLEYYNISFGA 220


>emb|CAN72060.1| hypothetical protein VITISV_037482 [Vitis vinifera]
          Length = 239

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 54/111 (48%), Positives = 67/111 (60%), Gaps = 5/111 (4%)
 Frame = -2

Query: 338 TDWMMHEFRLPATVKSTNCNLPSPKNNTL---EAEIWTLCRIFKRNASYRKYAPAWRETP 168
           TDWMMHEFRLPA  K+T     +P N T    E EIWTLCRIFKRN SYRK  P WRET 
Sbjct: 93  TDWMMHEFRLPADQKNT-----TPHNATXADXEVEIWTLCRIFKRNVSYRKSTPDWRETS 147

Query: 167 IKQNPSDSNSQTNSLESVNRDK--SFGAPVVQQKQSNKQFLSHTEERVHMF 21
            K+ P++S  +T +++S N +   SFGAP     +  K F+ H     + F
Sbjct: 148 AKRKPTNSRPKTGNMDSENWEGYISFGAPEALDNE-KKLFVGHNMNERNQF 197


Top