BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028321
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    50   3e-06
ref|XP_003521972.1| PREDICTED: uncharacterized protein LOC100800...    55   5e-06
emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]    55   5e-06
ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799...    55   6e-06

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 49.7 bits (117), Expect(2) = 3e-06
 Identities = 24/57 (42%), Positives = 35/57 (61%)
 Frame = -2

Query: 178 IQHLCFTSKWNKLIHALLNTARLSIMLKGGPIGFITPKRWLRQGDPLSPLFFPLAKD 8
           +Q   F  K+   I  +L +ARLS+++ G  +GF T    +RQGDPLSPL F L ++
Sbjct: 605 LQRFGFDEKFVHWILVILQSARLSVLVNGKAVGFFTCSHGVRQGDPLSPLLFCLVEE 661



 Score = 26.2 bits (56), Expect(2) = 3e-06
 Identities = 9/20 (45%), Positives = 18/20 (90%)
 Frame = -3

Query: 228 KKRYGRSMAVRVDITQAYNT 169
           K++YG ++A++VDI +A++T
Sbjct: 576 KRQYGGNVALKVDIAKAFDT 595


>ref|XP_003521972.1| PREDICTED: uncharacterized protein LOC100800774 [Glycine max]
          Length = 684

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/54 (42%), Positives = 35/54 (64%)
 Frame = -2

Query: 178 IQHLCFTSKWNKLIHALLNTARLSIMLKGGPIGFITPKRWLRQGDPLSPLFFPL 17
           ++ + F  +W K I+  L++A +SI++ G P G   PKR LRQGDPL+P  F +
Sbjct: 1   MKRMGFCDRWRKWIYGCLSSATISILINGSPTGEFVPKRGLRQGDPLAPFLFDI 54


>emb|CAN64680.1| hypothetical protein VITISV_016601 [Vitis vinifera]
          Length = 971

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/59 (44%), Positives = 36/59 (61%)
 Frame = -2

Query: 184 TSIQHLCFTSKWNKLIHALLNTARLSIMLKGGPIGFITPKRWLRQGDPLSPLFFPLAKD 8
           T ++ + F  KW + I   ++TA  S+M+ G P GF    R LRQGDPLSP  F +AK+
Sbjct: 351 TIMKKMGFGEKWIRWIQWCISTASFSVMINGTPTGFFQSSRGLRQGDPLSPYLFVIAKE 409


>ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
          Length = 3081

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/57 (40%), Positives = 37/57 (64%)
 Frame = -2

Query: 178  IQHLCFTSKWNKLIHALLNTARLSIMLKGGPIGFITPKRWLRQGDPLSPLFFPLAKD 8
            ++ + F SKW + IH  L +A +S+++ G P    +P+R LRQGDPL+PL F +  +
Sbjct: 1972 LRRMGFCSKWIQWIHGCLKSASISVLVNGSPTSEFSPQRGLRQGDPLAPLLFNITAE 2028