BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028309
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [...    42   2e-08
ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-l...    45   1e-07
ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-l...    45   2e-07
ref|XP_004141383.1| PREDICTED: WD repeat-containing protein 18-l...    43   3e-07
ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|2...    40   3e-07

>ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
           gi|302142303|emb|CBI19506.3| unnamed protein product
           [Vitis vinifera]
          Length = 448

 Score = 42.4 bits (98), Expect(2) = 2e-08
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 8   HVMNTYIKEFQQQGSSATSEMEMERVRFDS 97
           H++   IKE QQQGSSA +EMEMER++ DS
Sbjct: 384 HIIIDQIKELQQQGSSAATEMEMERLKIDS 413



 Score = 41.2 bits (95), Expect(2) = 2e-08
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +1

Query: 97  LEMAHQWMKMYEDLHHFCIDEFVDGD 174
           ++M  QW KMYE+LH FC++E +D D
Sbjct: 417 VQMVQQWKKMYENLHQFCVNELLDAD 442


>ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score = 44.7 bits (104), Expect(2) = 1e-07
 Identities = 19/31 (61%), Positives = 26/31 (83%)
 Frame = +2

Query: 2   TSHVMNTYIKEFQQQGSSATSEMEMERVRFD 94
           +SHV++ YIKE Q QGS+A SEMEME+++ D
Sbjct: 379 SSHVISNYIKELQHQGSAAASEMEMEKLKHD 409



 Score = 35.8 bits (81), Expect(2) = 1e-07
 Identities = 14/31 (45%), Positives = 22/31 (70%)
 Frame = +1

Query: 97  LEMAHQWMKMYEDLHHFCIDEFVDGDQNKRI 189
           ++MA+Q  KM E+LH FC+ E +DG Q + +
Sbjct: 414 VQMANQLKKMNENLHQFCVKELLDGGQARTL 444


>ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score = 44.7 bits (104), Expect(2) = 2e-07
 Identities = 19/31 (61%), Positives = 26/31 (83%)
 Frame = +2

Query: 2   TSHVMNTYIKEFQQQGSSATSEMEMERVRFD 94
           +SHV++ YIKE Q QGS+A SEMEME+++ D
Sbjct: 379 SSHVISNYIKELQHQGSAAASEMEMEKLKHD 409



 Score = 35.4 bits (80), Expect(2) = 2e-07
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +1

Query: 97  LEMAHQWMKMYEDLHHFCIDEFVDGDQNKRI 189
           ++MA+Q  KM E LH FC+ E +DG Q + +
Sbjct: 414 VQMANQLKKMNEKLHQFCVKELLDGSQARTL 444


>ref|XP_004141383.1| PREDICTED: WD repeat-containing protein 18-like [Cucumis sativus]
           gi|449531442|ref|XP_004172695.1| PREDICTED: WD
           repeat-containing protein 18-like [Cucumis sativus]
          Length = 451

 Score = 43.1 bits (100), Expect(2) = 3e-07
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = +1

Query: 100 EMAHQWMKMYEDLHHFCIDEFVDGDQNKRI 189
           +M   W KMY++LH FC++E +DG+Q K I
Sbjct: 417 QMLQHWRKMYDNLHQFCVNELLDGNQTKNI 446



 Score = 36.2 bits (82), Expect(2) = 3e-07
 Identities = 18/31 (58%), Positives = 24/31 (77%)
 Frame = +2

Query: 2   TSHVMNTYIKEFQQQGSSATSEMEMERVRFD 94
           +SHVM+  I E QQQGS+AT  ME+ER++ D
Sbjct: 382 SSHVMDDQITELQQQGSAATG-MELERLKHD 411


>ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|222835469|gb|EEE73904.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 39.7 bits (91), Expect(2) = 3e-07
 Identities = 17/31 (54%), Positives = 25/31 (80%)
 Frame = +2

Query: 2   TSHVMNTYIKEFQQQGSSATSEMEMERVRFD 94
           +S V+N  IKE QQQGS+A +EME+E+++ D
Sbjct: 380 SSQVINCQIKELQQQGSAAAAEMEVEKLKLD 410



 Score = 39.7 bits (91), Expect(2) = 3e-07
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +1

Query: 97  LEMAHQWMKMYEDLHHFCIDEFVDGDQNK 183
           ++M  +W K Y++LH FC+DE ++GD  K
Sbjct: 415 MQMLQRWKKTYDNLHEFCVDELLEGDNVK 443