BLASTX nr result

ID: Coptis24_contig00028305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028305
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30685.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]     72   6e-11

>emb|CBI30685.3| unnamed protein product [Vitis vinifera]
          Length = 841

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
 Frame = +2

Query: 71   QWTCGKAPGNEDNEIYNALSRVPSSETISRSSEFEGIDDNGVYPDGDYEDPDANGVQPSY 250
            QW CG+   N+D+E+Y+AL R+ S+E++S S E EG+    +  D  +    ANGV+PS 
Sbjct: 585  QWECGETLINKDHELYDALCRISSTESVSSSQELEGVAHGTIRADSGH---IANGVEPSQ 641

Query: 251  NGSLNSLP------------VEKDMG----LVLQFSVEAIXXXXXXXXVQWRAVK---QH 373
            +G L  LP            ++ D      L +Q+  E++        +QWRA+K     
Sbjct: 642  SGLLLDLPSFDAVNPLLKQEIKDDSDPRVLLEVQYPKESMPPPPPLPPLQWRALKPDSDM 701

Query: 374  LENEQFSISDVSTNQHSEQVPAANTCQQPHMSTPKQQMHIEETNPCPPES 523
             E +Q+ IS+   +    ++  +   Q       +QQ ++ E N C P+S
Sbjct: 702  AEEKQYVISEALDHLFDLKLLESTDSQHSEPVLARQQQNV-EANACKPKS 750


>ref|XP_002266486.1| PREDICTED: protein SCAR3-like [Vitis vinifera]
          Length = 1135

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 19/170 (11%)
 Frame = +2

Query: 71   QWTCGKAPGNEDNEIYNALSRVPSSETISRSSEFEGIDDNGVYPDGDYEDPDANGVQPSY 250
            QW CG+   N+D+E+Y+AL R+ S+E++S S E EG+    +  D  +    ANGV+PS 
Sbjct: 879  QWECGETLINKDHELYDALCRISSTESVSSSQELEGVAHGTIRADSGH---IANGVEPSQ 935

Query: 251  NGSLNSLP------------VEKDMG----LVLQFSVEAIXXXXXXXXVQWRAVK---QH 373
            +G L  LP            ++ D      L +Q+  E++        +QWRA+K     
Sbjct: 936  SGLLLDLPSFDAVNPLLKQEIKDDSDPRVLLEVQYPKESMPPPPPLPPLQWRALKPDSDM 995

Query: 374  LENEQFSISDVSTNQHSEQVPAANTCQQPHMSTPKQQMHIEETNPCPPES 523
             E +Q+ IS+   +    ++  +   Q       +QQ ++ E N C P+S
Sbjct: 996  AEEKQYVISEALDHLFDLKLLESTDSQHSEPVLARQQQNV-EANACKPKS 1044


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