BLASTX nr result

ID: Coptis24_contig00028304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028304
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001031651.1| (E)-beta-ocimene synthase [Arabidopsis thali...    56   3e-06
ref|NP_567511.3| (E)-beta-ocimene synthase [Arabidopsis thaliana...    56   3e-06
gb|AAN65379.1| E-beta-ocimene synthase [Arabidopsis thaliana]          56   3e-06
emb|CAB10449.1| limonene cyclase like protein [Arabidopsis thali...    56   3e-06
gb|AAM62867.1| unknown [Arabidopsis thaliana]                          56   3e-06

>ref|NP_001031651.1| (E)-beta-ocimene synthase [Arabidopsis thaliana]
           gi|332658394|gb|AEE83794.1| (E)-beta-ocimene synthase
           [Arabidopsis thaliana]
          Length = 396

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = +3

Query: 9   LKENVRQLLNNSVGSVHNLELIDAVQRLGVGHHYKEEIKRTLDNIYISTTIA 164
           LK+ V ++LN + G +  LELID +QRLGV +H+++EIK+TL N+++    A
Sbjct: 60  LKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRA 111


>ref|NP_567511.3| (E)-beta-ocimene synthase [Arabidopsis thaliana]
           gi|205829248|sp|A4FVP2.1|TPS03_ARATH RecName:
           Full=Tricyclene synthase, chloroplastic; AltName:
           Full=(E)-beta-ocimene synthase; AltName:
           Full=(E,E)-alpha-farnesene synthase; AltName:
           Full=Terpenoid synthase 3; Short=AtTPS03; Flags:
           Precursor gi|133778826|gb|ABO38753.1| At4g16740
           [Arabidopsis thaliana] gi|332658393|gb|AEE83793.1|
           (E)-beta-ocimene synthase [Arabidopsis thaliana]
          Length = 565

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = +3

Query: 9   LKENVRQLLNNSVGSVHNLELIDAVQRLGVGHHYKEEIKRTLDNIYISTTIA 164
           LK+ V ++LN + G +  LELID +QRLGV +H+++EIK+TL N+++    A
Sbjct: 60  LKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRA 111


>gb|AAN65379.1| E-beta-ocimene synthase [Arabidopsis thaliana]
          Length = 540

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = +3

Query: 9   LKENVRQLLNNSVGSVHNLELIDAVQRLGVGHHYKEEIKRTLDNIYISTTIA 164
           LK+ V ++LN + G +  LELID +QRLGV +H+++EIK+TL N+++    A
Sbjct: 35  LKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRA 86


>emb|CAB10449.1| limonene cyclase like protein [Arabidopsis thaliana]
           gi|7268424|emb|CAB78716.1| limonene cyclase like protein
           [Arabidopsis thaliana]
          Length = 1024

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = +3

Query: 9   LKENVRQLLNNSVGSVHNLELIDAVQRLGVGHHYKEEIKRTLDNIYISTTIA 164
           LK+ V ++LN + G +  LELID +QRLGV +H+++EIK+TL N+++    A
Sbjct: 13  LKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRA 64


>gb|AAM62867.1| unknown [Arabidopsis thaliana]
          Length = 144

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/52 (46%), Positives = 38/52 (73%)
 Frame = +3

Query: 9   LKENVRQLLNNSVGSVHNLELIDAVQRLGVGHHYKEEIKRTLDNIYISTTIA 164
           LK+ V ++LN + G +  LELID +QRLGV +H+++EIK+TL N+++    A
Sbjct: 60  LKQEVSKMLNETEGLLEQLELIDTLQRLGVSYHFEQEIKKTLTNVHVKNVRA 111


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