BLASTX nr result

ID: Coptis24_contig00028290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028290
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68387.1| hypothetical protein VITISV_012455 [Vitis vinifera]   165   3e-39
emb|CBI31835.3| unnamed protein product [Vitis vinifera]              161   6e-38
ref|XP_002274647.1| PREDICTED: uncharacterized protein LOC100252...   160   1e-37
ref|XP_004140790.1| PREDICTED: uncharacterized protein LOC101219...   143   1e-32
ref|XP_002322447.1| predicted protein [Populus trichocarpa] gi|2...   141   5e-32

>emb|CAN68387.1| hypothetical protein VITISV_012455 [Vitis vinifera]
          Length = 349

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/132 (62%), Positives = 101/132 (76%), Gaps = 2/132 (1%)
 Frame = -2

Query: 488 ILKFSFLLNTSCP--QLISVREALCVRGYWSIPEEVSSAHILDWFEIEVQLIGLSNLKDT 315
           + K+  LL   C   QLIS+R ALCVRGYW+ P++VS A +LDW E E++ IGLS+LKDT
Sbjct: 218 LFKYQXLLELYCLNFQLISIRGALCVRGYWNTPDDVSKARVLDWVEKEIEKIGLSDLKDT 277

Query: 314 LYFPQSEDSGVWEFVPKGTRSLLIQPVLGASEVTPNETKKKIRGFILLASSMSYAYGDRD 135
           LYFPQS DSG+WE +PKGT SLL+QPV        +E  +KI GF+LLASSM+YAY D+D
Sbjct: 278 LYFPQSADSGLWEMLPKGTCSLLVQPVXQIPSQGTDE-MEKIDGFVLLASSMNYAYTDKD 336

Query: 134 RAWIGAVANKFR 99
           RAWIGAVANKFR
Sbjct: 337 RAWIGAVANKFR 348


>emb|CBI31835.3| unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  161 bits (407), Expect = 6e-38
 Identities = 78/119 (65%), Positives = 96/119 (80%)
 Frame = -2

Query: 446 LISVREALCVRGYWSIPEEVSSAHILDWFEIEVQLIGLSNLKDTLYFPQSEDSGVWEFVP 267
           LIS+R ALCVRGYW+ P++VS A +LDW E E++ IGLS+LKDTLYFPQS DSG+WE +P
Sbjct: 196 LISIRGALCVRGYWNTPDDVSKARVLDWVEKEIEKIGLSDLKDTLYFPQSADSGLWEMLP 255

Query: 266 KGTRSLLIQPVLGASEVTPNETKKKIRGFILLASSMSYAYGDRDRAWIGAVANKFRENV 90
           KGT SLL+QPV        +E  +KI GF+LLASSM+YAY D+DRAWIGAVANKFR ++
Sbjct: 256 KGTCSLLVQPVSQIPSQGTDE-MEKIDGFVLLASSMNYAYTDKDRAWIGAVANKFRVSI 313


>ref|XP_002274647.1| PREDICTED: uncharacterized protein LOC100252183 [Vitis vinifera]
          Length = 311

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/116 (67%), Positives = 94/116 (81%)
 Frame = -2

Query: 446 LISVREALCVRGYWSIPEEVSSAHILDWFEIEVQLIGLSNLKDTLYFPQSEDSGVWEFVP 267
           LIS+R ALCVRGYW+ P++VS A +LDW E E++ IGLS+LKDTLYFPQS DSG+WE +P
Sbjct: 196 LISIRGALCVRGYWNTPDDVSKARVLDWVEKEIEKIGLSDLKDTLYFPQSADSGLWEMLP 255

Query: 266 KGTRSLLIQPVLGASEVTPNETKKKIRGFILLASSMSYAYGDRDRAWIGAVANKFR 99
           KGT SLL+QPV        +E  +KI GF+LLASSM+YAY D+DRAWIGAVANKFR
Sbjct: 256 KGTCSLLVQPVSQIPSQGTDE-MEKIDGFVLLASSMNYAYTDKDRAWIGAVANKFR 310


>ref|XP_004140790.1| PREDICTED: uncharacterized protein LOC101219803 [Cucumis sativus]
           gi|449530412|ref|XP_004172189.1| PREDICTED:
           uncharacterized LOC101219803 [Cucumis sativus]
          Length = 288

 Score =  143 bits (361), Expect = 1e-32
 Identities = 72/127 (56%), Positives = 95/127 (74%), Gaps = 1/127 (0%)
 Frame = -2

Query: 479 FSFLLNT-SCPQLISVREALCVRGYWSIPEEVSSAHILDWFEIEVQLIGLSNLKDTLYFP 303
           +  L NT S   LI  + ALCVRGYW+ P ++SSA +L WFE ++Q IGLS LKD +YFP
Sbjct: 157 YILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFP 216

Query: 302 QSEDSGVWEFVPKGTRSLLIQPVLGASEVTPNETKKKIRGFILLASSMSYAYGDRDRAWI 123
           Q  +SG+W+ +PKGTRS+L+QPV+   + + NE  + + GFILLASS+SYA+ D+DRAWI
Sbjct: 217 QISESGLWQMLPKGTRSVLVQPVVQNLKQSGNEV-QNMGGFILLASSLSYAFSDKDRAWI 275

Query: 122 GAVANKF 102
            AVANKF
Sbjct: 276 RAVANKF 282


>ref|XP_002322447.1| predicted protein [Populus trichocarpa] gi|222869443|gb|EEF06574.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/116 (56%), Positives = 90/116 (77%)
 Frame = -2

Query: 446 LISVREALCVRGYWSIPEEVSSAHILDWFEIEVQLIGLSNLKDTLYFPQSEDSGVWEFVP 267
           LIS++  LCVRGYW   +++S   +LDWF+ +++ IGLS++KDTLYFPQ+ +S +WE +P
Sbjct: 150 LISIQGELCVRGYWKTSDKMSKDEVLDWFKEQIENIGLSDVKDTLYFPQTTESEIWEMLP 209

Query: 266 KGTRSLLIQPVLGASEVTPNETKKKIRGFILLASSMSYAYGDRDRAWIGAVANKFR 99
           +GTRSLL++PVL A+  + N+T+    GFILLASS+ YAY D+DRAWI A  NKFR
Sbjct: 210 EGTRSLLVEPVLQATVQSGNKTENN-EGFILLASSIGYAYSDKDRAWIRATGNKFR 264


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