BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028281
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75895.1| unknown [Picea sitchensis]                             112   7e-23
ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucum...   112   9e-23
ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus ...   108   1e-21
ref|XP_002308504.1| f-box family protein [Populus trichocarpa] g...   108   1e-21
ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glyci...   107   2e-21

>gb|ADE75895.1| unknown [Picea sitchensis]
          Length = 445

 Score =  112 bits (281), Expect = 7e-23
 Identities = 56/156 (35%), Positives = 89/156 (57%)
 Frame = -3

Query: 771 GDLMVYYLEPSGQLVGCNTNKKIAIIYPPPVIHGQACSFDLAECHGRILILLLMEENRAE 592
           G+ +VY+L   G++V CNT+K +   +PP +      S D+  C GR+ +++L+E   + 
Sbjct: 289 GEEIVYFLNRGGKVVACNTHKGLWYEFPPLLPSPLEYSLDIVNCGGRMFVVVLLEFLESA 348

Query: 591 TLRVWEFHCQEKRWNNIAAMPLEMSQGYNGLNTEITCTGCGDYIMVCLSSMEYNFTMTVV 412
           T+R+WE++     W  + AMP  MSQ Y G   +I C G  + IM+C+SS ++N    V+
Sbjct: 349 TVRIWEYNETVFNWVQVLAMPPSMSQQYYGKKADINCIGYDNLIMICISSGQFN--SQVL 406

Query: 411 FNIVENTWKELPACLDPNCGHPKRLLSAFSFVPNIE 304
            NI+E +W ELP C         + +SAF F P +E
Sbjct: 407 CNILEKSWLELPPCYLSGSHKVDKFVSAFPFEPKLE 442


>ref|XP_004141357.1| PREDICTED: F-box only protein 13-like [Cucumis sativus]
           gi|449524430|ref|XP_004169226.1| PREDICTED: F-box only
           protein 13-like [Cucumis sativus]
          Length = 414

 Score =  112 bits (280), Expect = 9e-23
 Identities = 58/158 (36%), Positives = 90/158 (56%), Gaps = 1/158 (0%)
 Frame = -3

Query: 774 SGDLMVYYLEPSGQLVGCNTNKKIAIIYPPPVIHGQACSFDLAECHGRILILLLMEENRA 595
           +G+  VY++  SG ++ CN NKK  + YP  +      S D+ EC G +L+++L E    
Sbjct: 259 NGEDTVYFISSSGTIMACNLNKKCFVEYPRLLPVFSEYSIDVVECQGEMLVVMLSEFLET 318

Query: 594 ETLRVWEFHCQEKRWNNIAAMPLEMSQGYNGLNTEITCTGCGDYIMVCLSSME-YNFTMT 418
            +LRVW +  + + W+ IAA+P  MS  + G   +I C G GD I++C++S + Y +   
Sbjct: 319 ASLRVWRYDEEARTWHQIAALPPAMSHEWYGKKVDINCVGAGDQILICMNSNDLYTY--- 375

Query: 417 VVFNIVENTWKELPACLDPNCGHPKRLLSAFSFVPNIE 304
           ++ ++VEN W ELP C     G     +SAFSF P IE
Sbjct: 376 LLCDLVENQWTELPKCY--MNGEAVEFMSAFSFEPRIE 411


>ref|XP_002516174.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544660|gb|EEF46176.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 412

 Score =  108 bits (271), Expect = 1e-21
 Identities = 60/157 (38%), Positives = 81/157 (51%)
 Frame = -3

Query: 774 SGDLMVYYLEPSGQLVGCNTNKKIAIIYPPPVIHGQACSFDLAECHGRILILLLMEENRA 595
           +G+   Y+L  SG +V CN   K    YP  +      S D+ EC G +L++LL E   +
Sbjct: 257 NGEETAYFLSSSGTIVACNLTGKCFFEYPRLLPVFYEYSIDIVECRGEMLVVLLSEFFGS 316

Query: 594 ETLRVWEFHCQEKRWNNIAAMPLEMSQGYNGLNTEITCTGCGDYIMVCLSSMEYNFTMTV 415
            +LR+W F    + W  IAAMP  MS  + G   +I C G GD I +CL+S E  F   +
Sbjct: 317 ASLRIWRFSEDIRSWQQIAAMPPAMSHEFYGKKVDINCVGAGDQIFICLNSAE--FFSYI 374

Query: 414 VFNIVENTWKELPACLDPNCGHPKRLLSAFSFVPNIE 304
           + N+  N W ELP C     G     +SAFSF P IE
Sbjct: 375 MCNLRNNDWVELPKCF--MNGEAVEFMSAFSFEPRIE 409


>ref|XP_002308504.1| f-box family protein [Populus trichocarpa]
           gi|222854480|gb|EEE92027.1| f-box family protein
           [Populus trichocarpa]
          Length = 409

 Score =  108 bits (270), Expect = 1e-21
 Identities = 61/156 (39%), Positives = 81/156 (51%)
 Frame = -3

Query: 771 GDLMVYYLEPSGQLVGCNTNKKIAIIYPPPVIHGQACSFDLAECHGRILILLLMEENRAE 592
           G+ +VY+L  SG +V CN   K    YP  +      S D+ EC G +L+++L E   + 
Sbjct: 255 GEEIVYFLSSSGTIVSCNLTTKCFSEYPRLLPVFCEYSIDVVECKGEMLVVVLSEFFESA 314

Query: 591 TLRVWEFHCQEKRWNNIAAMPLEMSQGYNGLNTEITCTGCGDYIMVCLSSMEYNFTMTVV 412
            LR+W F    + WN I AMP  MS  + G   +I C G GD I +CL+S E  F   VV
Sbjct: 315 NLRIWRFDESIRSWNQIVAMPPAMSHEFYGKKVDINCVGAGDQIFICLNSAE--FFRYVV 372

Query: 411 FNIVENTWKELPACLDPNCGHPKRLLSAFSFVPNIE 304
            ++  N W ELP C     G     +SAFSF P IE
Sbjct: 373 CDLRTNEWIELPKCF--KNGEAVEFMSAFSFEPRIE 406


>ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 407

 Score =  107 bits (268), Expect = 2e-21
 Identities = 62/158 (39%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
 Frame = -3

Query: 771 GDLMVYYLEPSGQLVGCNTNKKIAIIYPPPVIHGQACSFDLAECHGRILILLLMEENRAE 592
           G   VY+L  SG +V CN   K    YP  +      S D+ EC   +L++LL E   + 
Sbjct: 253 GQETVYFLSSSGMVVACNLTSKYFFEYPRLLPVFSEYSIDIVECGSEMLVVLLSEFLESA 312

Query: 591 TLRVWEFHCQEKRWNNIAAMPLEMSQGYNGLNTEITCTGCGDYIMVCLSSMEYNFTMTVV 412
           +LRVW++    + W  IAAMP  MSQ + G   +I C G GD I +CL+S E      V+
Sbjct: 313 SLRVWKYDEANRCWKQIAAMPAAMSQEWYGKKADINCVGAGDRIFICLNSPE--LCAYVL 370

Query: 411 FNIVENTWKELPACLDPNC--GHPKRLLSAFSFVPNIE 304
            ++V N W ELP C    C  G     +SAFSF P IE
Sbjct: 371 CDLVTNKWTELPKC----CLNGELMEFMSAFSFEPRIE 404