BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028230
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40419.3| unnamed protein product [Vitis vinifera]              118   6e-25
emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]   118   6e-25
ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like...   115   5e-24
ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyra...   109   3e-22

>emb|CBI40419.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/119 (49%), Positives = 73/119 (61%)
 Frame = -2

Query: 410 NTEGVIIPRIIFVAXXXXXXXXXXXXXNSVAGLDQMVINSYPKFPFSKSKNXXXXXXXXX 231
           +++G+++PRIIFVA               V GLDQ VI+SYPKFPFSKS           
Sbjct: 134 SSDGIVLPRIIFVAEDEDEDQNV------VVGLDQAVIDSYPKFPFSKSNTHLDSVC--- 184

Query: 230 XXXXXXXXXXXXXXXXSICLCDYKEGEMLRMMPDCRHFFHIFCVDAWLRLHASCPVCRN 54
                           SICLC+YK+ EMLRM+PDCRH FH++CVDAWL+L+ASCPVCRN
Sbjct: 185 ----------------SICLCEYKDSEMLRMLPDCRHCFHLYCVDAWLKLNASCPVCRN 227


>emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
          Length = 641

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/119 (49%), Positives = 73/119 (61%)
 Frame = -2

Query: 410 NTEGVIIPRIIFVAXXXXXXXXXXXXXNSVAGLDQMVINSYPKFPFSKSKNXXXXXXXXX 231
           +++G+++PRIIFVA               V GLDQ VI+SYPKFPFSKS           
Sbjct: 77  SSDGIVLPRIIFVAEDEDEDQNV------VVGLDQAVIDSYPKFPFSKSNTHLDSVC--- 127

Query: 230 XXXXXXXXXXXXXXXXSICLCDYKEGEMLRMMPDCRHFFHIFCVDAWLRLHASCPVCRN 54
                           SICLC+YK+ EMLRM+PDCRH FH++CVDAWL+L+ASCPVCRN
Sbjct: 128 ----------------SICLCEYKDSEMLRMLPDCRHCFHLYCVDAWLKLNASCPVCRN 170


>ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus]
           gi|449480258|ref|XP_004155843.1| PREDICTED: RING-H2
           finger protein ATL67-like [Cucumis sativus]
          Length = 184

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/116 (49%), Positives = 70/116 (60%)
 Frame = -2

Query: 401 GVIIPRIIFVAXXXXXXXXXXXXXNSVAGLDQMVINSYPKFPFSKSKNXXXXXXXXXXXX 222
           G+I+P+IIFVA               V GLDQ VINSYPKFPFS+ K+            
Sbjct: 61  GIILPQIIFVAEDDAAPDRDDDN--GVVGLDQTVINSYPKFPFSRDKSMAGANCVC---- 114

Query: 221 XXXXXXXXXXXXXSICLCDYKEGEMLRMMPDCRHFFHIFCVDAWLRLHASCPVCRN 54
                        SICLC+YK+ EMLRMMP+CRH+FH+ C+DAWL+L+ SCPVCRN
Sbjct: 115 -------------SICLCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRN 157


>ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|222860935|gb|EEE98477.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  111 bits (277), Expect = 7e-23
 Identities = 57/121 (47%), Positives = 69/121 (57%)
 Frame = -2

Query: 416 NPNTEGVIIPRIIFVAXXXXXXXXXXXXXNSVAGLDQMVINSYPKFPFSKSKNXXXXXXX 237
           N   +G+I+PRIIFVA              +  GL+Q VINSYPKF FSK          
Sbjct: 73  NSTADGIILPRIIFVAEDDEEQERDLES--AAVGLNQAVINSYPKFQFSKDGGFSERTNN 130

Query: 236 XXXXXXXXXXXXXXXXXXSICLCDYKEGEMLRMMPDCRHFFHIFCVDAWLRLHASCPVCR 57
                             SICLC+YK+ EMLRMMPDCRH+FH+ C+DAWL+L+ SCPVCR
Sbjct: 131 FCNTC-------------SICLCEYKDLEMLRMMPDCRHYFHLLCLDAWLKLNGSCPVCR 177

Query: 56  N 54
           N
Sbjct: 178 N 178


>ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326060|gb|EFH56480.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  109 bits (272), Expect = 3e-22
 Identities = 57/115 (49%), Positives = 67/115 (58%)
 Frame = -2

Query: 398 VIIPRIIFVAXXXXXXXXXXXXXNSVAGLDQMVINSYPKFPFSKSKNXXXXXXXXXXXXX 219
           VI+PRIIFVA               V GLDQ VINSYPKF FSK  +             
Sbjct: 80  VILPRIIFVAEEDNEDLEAGDV---VVGLDQAVINSYPKFHFSKDSSAASSDGFGGGGDT 136

Query: 218 XXXXXXXXXXXXSICLCDYKEGEMLRMMPDCRHFFHIFCVDAWLRLHASCPVCRN 54
                       SICLC+YKE EMLRMMP+C+H+FH+ C+DAWL+L+ SCPVCRN
Sbjct: 137 TC----------SICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRN 181