BLASTX nr result

ID: Coptis24_contig00028227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028227
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32619.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_004137799.1| PREDICTED: uncharacterized protein LOC101211...   161   6e-38
ref|XP_002525194.1| conserved hypothetical protein [Ricinus comm...   158   4e-37
dbj|BAJ86103.1| predicted protein [Hordeum vulgare subsp. vulgare]    157   6e-37
ref|XP_002322846.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36

>emb|CBI32619.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  164 bits (414), Expect = 9e-39
 Identities = 74/95 (77%), Positives = 87/95 (91%)
 Frame = +3

Query: 3   NDNSEKDDKFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRRSNYPLSEEVDPIKRA 182
           N+++ + DKFSTDWDKAWSSF+KQGKK LFSQF+P+KYV+WNPRRSNYPLSEEVDPIKR 
Sbjct: 50  NNDNNRGDKFSTDWDKAWSSFRKQGKKRLFSQFSPDKYVTWNPRRSNYPLSEEVDPIKRT 109

Query: 183 ERSNLMLWTSPRFTLAGAIVVVSLLLIYTLLAPMK 287
           ERSNLMLWTSP FTL  AI++V+ LLIYT+LAP+K
Sbjct: 110 ERSNLMLWTSPGFTLTVAIIIVTFLLIYTILAPVK 144


>ref|XP_004137799.1| PREDICTED: uncharacterized protein LOC101211971 [Cucumis sativus]
           gi|449519160|ref|XP_004166603.1| PREDICTED:
           uncharacterized protein LOC101226769 [Cucumis sativus]
          Length = 145

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/95 (76%), Positives = 86/95 (90%), Gaps = 1/95 (1%)
 Frame = +3

Query: 3   NDNSEKD-DKFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRRSNYPLSEEVDPIKR 179
           +DN ++  DK STDWDKAWS FKK+GKK++FS F+PNKYVSWNPRRS YPLSEEVDPIKR
Sbjct: 49  DDNDDQTRDKLSTDWDKAWSKFKKRGKKTMFSDFSPNKYVSWNPRRSEYPLSEEVDPIKR 108

Query: 180 AERSNLMLWTSPRFTLAGAIVVVSLLLIYTLLAPM 284
            ERSNLMLWTSPRFTLAGAIV+++ LL+YT+LAP+
Sbjct: 109 TERSNLMLWTSPRFTLAGAIVIITFLLVYTILAPI 143


>ref|XP_002525194.1| conserved hypothetical protein [Ricinus communis]
           gi|223535491|gb|EEF37160.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  158 bits (400), Expect = 4e-37
 Identities = 71/88 (80%), Positives = 83/88 (94%)
 Frame = +3

Query: 24  DKFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRRSNYPLSEEVDPIKRAERSNLML 203
           +KFSTDWDKAWS+F+KQGKK+LFS F+PNKYVSWNPRRS YPLSEEVDPIKRAERSNL L
Sbjct: 12  EKFSTDWDKAWSNFRKQGKKTLFSGFSPNKYVSWNPRRSKYPLSEEVDPIKRAERSNLEL 71

Query: 204 WTSPRFTLAGAIVVVSLLLIYTLLAPMK 287
           WTSPRFTL GAI++VS LL+YT+L+P++
Sbjct: 72  WTSPRFTLVGAILIVSFLLLYTILSPIR 99


>dbj|BAJ86103.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 124

 Score =  157 bits (398), Expect = 6e-37
 Identities = 71/91 (78%), Positives = 82/91 (90%)
 Frame = +3

Query: 15  EKDDKFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRRSNYPLSEEVDPIKRAERSN 194
           ++ D  STDWDKAWS+FKK+GKK+LFS+F PNKYV+WNPRRS YPLSEEVDPIKRAERSN
Sbjct: 34  DEGDTSSTDWDKAWSTFKKEGKKTLFSEFTPNKYVTWNPRRSEYPLSEEVDPIKRAERSN 93

Query: 195 LMLWTSPRFTLAGAIVVVSLLLIYTLLAPMK 287
           LMLWTSPRFTL GAI++VS LLIYT++ P K
Sbjct: 94  LMLWTSPRFTLVGAIIIVSALLIYTIVVPPK 124


>ref|XP_002322846.1| predicted protein [Populus trichocarpa] gi|222867476|gb|EEF04607.1|
           predicted protein [Populus trichocarpa]
          Length = 89

 Score =  157 bits (396), Expect = 1e-36
 Identities = 68/88 (77%), Positives = 81/88 (92%)
 Frame = +3

Query: 24  DKFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRRSNYPLSEEVDPIKRAERSNLML 203
           DKFSTDWDKAWS+F+K+GKK+ FSQF+PNKYV+WNP+RSNYPLSEEVDPIKRAERSNL L
Sbjct: 2   DKFSTDWDKAWSNFRKKGKKAFFSQFSPNKYVTWNPKRSNYPLSEEVDPIKRAERSNLRL 61

Query: 204 WTSPRFTLAGAIVVVSLLLIYTLLAPMK 287
           WTSP FTL GAI++V+ LL+YT++ P K
Sbjct: 62  WTSPEFTLVGAIIIVTFLLVYTIVVPSK 89


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