BLASTX nr result

ID: Coptis24_contig00028224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028224
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-...   165   3e-39
ref|XP_002306833.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39
ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-...   163   2e-38
ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|XP_002263559.1| PREDICTED: LOB domain-containing protein 16 ...   158   5e-37

>ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score =  165 bits (418), Expect = 3e-39
 Identities = 86/121 (71%), Positives = 100/121 (82%), Gaps = 4/121 (3%)
 Frame = -2

Query: 353 FAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGY 174
           FAAIHKVFGASNVSKLLLH+P  DRCEAVVTIAYEAQARIRDPVYGCV+HIFALQQQV  
Sbjct: 46  FAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVSHIFALQQQVAC 105

Query: 173 LQSQLMQVKAQLSNNLVEAQSLGNHQYWAGN---LVGGTQNLLY-PTYMQSISPQSSLDS 6
           LQ+QLMQVKAQL+ NLVE++++ ++  W GN   + G   N  + PTYM  ISPQSSL+S
Sbjct: 106 LQAQLMQVKAQLAQNLVESRNIESNHQWTGNNNSVSGQPMNHPFCPTYMNPISPQSSLES 165

Query: 5   V 3
           +
Sbjct: 166 I 166


>ref|XP_002306833.1| predicted protein [Populus trichocarpa] gi|222856282|gb|EEE93829.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  165 bits (418), Expect = 3e-39
 Identities = 85/121 (70%), Positives = 97/121 (80%), Gaps = 4/121 (3%)
 Frame = -2

Query: 353 FAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGY 174
           FAAIHKVFGASNVSKLLLHVP+ +RCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQV  
Sbjct: 41  FAAIHKVFGASNVSKLLLHVPVAERCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAC 100

Query: 173 LQSQLMQVKAQLSNNLVEAQSLGN---HQYWAGNLVGGTQNL-LYPTYMQSISPQSSLDS 6
           LQ+QLMQVKAQL+ NL+++  +     H  W GN + G  +   +P Y+  ISPQSSLDS
Sbjct: 101 LQAQLMQVKAQLAQNLIDSPRINAENIHHQWQGNNISGVPSFPTHPNYINPISPQSSLDS 160

Query: 5   V 3
           V
Sbjct: 161 V 161


>ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score =  163 bits (412), Expect = 2e-38
 Identities = 85/121 (70%), Positives = 98/121 (80%), Gaps = 4/121 (3%)
 Frame = -2

Query: 353 FAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGY 174
           FAAIHKVFGASNVSKLLLH+P  DRCEAVVTI YEAQARIRDPVYGCV+HIFALQQQV  
Sbjct: 46  FAAIHKVFGASNVSKLLLHIPAHDRCEAVVTITYEAQARIRDPVYGCVSHIFALQQQVAR 105

Query: 173 LQSQLMQVKAQLSNNLVEAQSLGNHQYWAGNLVGGTQNLL----YPTYMQSISPQSSLDS 6
           LQ+QLMQVKAQL+ NLVE++++ N+ +  GN    T  L+     PTYM  ISPQSSL+S
Sbjct: 106 LQAQLMQVKAQLTQNLVESRNIENNHHLQGNNNNVTGQLMNHPFCPTYMNPISPQSSLES 165

Query: 5   V 3
           +
Sbjct: 166 I 166


>ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|222843783|gb|EEE81330.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  163 bits (412), Expect = 2e-38
 Identities = 85/121 (70%), Positives = 96/121 (79%), Gaps = 4/121 (3%)
 Frame = -2

Query: 353 FAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGY 174
           FAAIHKVFGASNVSKLLLHVP+ DR EAVVTIAYEAQARIRDPVYGCVAHIF+LQQQV  
Sbjct: 41  FAAIHKVFGASNVSKLLLHVPVADRYEAVVTIAYEAQARIRDPVYGCVAHIFSLQQQVAC 100

Query: 173 LQSQLMQVKAQLSNNLVEAQSL---GNHQYWAGNLVGGTQNL-LYPTYMQSISPQSSLDS 6
           LQ+QLMQVKAQL+ NL+++  +     H  W GN + G  +   Y TY+  ISPQSSLDS
Sbjct: 101 LQAQLMQVKAQLAQNLIDSTRINIENTHHQWQGNNISGVSSFPSYQTYINPISPQSSLDS 160

Query: 5   V 3
           V
Sbjct: 161 V 161


>ref|XP_002263559.1| PREDICTED: LOB domain-containing protein 16 [Vitis vinifera]
           gi|297744118|emb|CBI37088.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score =  158 bits (399), Expect = 5e-37
 Identities = 83/118 (70%), Positives = 92/118 (77%), Gaps = 1/118 (0%)
 Frame = -2

Query: 353 FAAIHKVFGASNVSKLLLHVPIPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVGY 174
           FAAIHKVFGASNVSKLLLHVP+ DRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQV  
Sbjct: 38  FAAIHKVFGASNVSKLLLHVPVADRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAC 97

Query: 173 LQSQLMQVKAQLSNNLVEAQSLGN-HQYWAGNLVGGTQNLLYPTYMQSISPQSSLDSV 3
           LQ+QLMQ+KAQL+NN       GN    W GN+ G      +P YM S+SPQ SL+ +
Sbjct: 98  LQAQLMQLKAQLANN------TGNLENQWQGNVSGAPSFQNFPGYMNSVSPQCSLELI 149


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