BLASTX nr result

ID: Coptis24_contig00028219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028219
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555257.1| PREDICTED: uncharacterized amino-acid permea...   177   1e-42
ref|XP_003536664.1| PREDICTED: uncharacterized amino-acid permea...   177   2e-42
ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cu...   176   2e-42
ref|XP_002526293.1| GABA-specific permease, putative [Ricinus co...   175   6e-42
emb|CBI26962.3| unnamed protein product [Vitis vinifera]              174   1e-41

>ref|XP_003555257.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Glycine max]
          Length = 515

 Score =  177 bits (449), Expect = 1e-42
 Identities = 84/121 (69%), Positives = 96/121 (79%), Gaps = 1/121 (0%)
 Frame = -3

Query: 362 SSHVP-NGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGLR 186
           SSHV  NG A +DSG +RL +LGYKQELKRDL             SVLTGVTTLYNTGL 
Sbjct: 3   SSHVTANGHAPLDSGHARLKELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNTGLN 62

Query: 185 FGGPIVMVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFASWLTGW 6
           +GGP+ +VYGWF+A  FT++V  SMAEICSS+PTSGGLYYWSAKLAGP+WAPFASW+TGW
Sbjct: 63  YGGPVSLVYGWFVASGFTMLVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFASWITGW 122

Query: 5   F 3
           F
Sbjct: 123 F 123


>ref|XP_003536664.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Glycine max]
          Length = 520

 Score =  177 bits (448), Expect = 2e-42
 Identities = 84/122 (68%), Positives = 96/122 (78%), Gaps = 1/122 (0%)
 Frame = -3

Query: 365 ISSHV-PNGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGL 189
           + SHV  NG A +DSG +RL +LGYKQELKRDL             SVLTGVTTLYNTGL
Sbjct: 7   LPSHVVANGHAPLDSGHARLKELGYKQELKRDLSVISNFAFSFSIISVLTGVTTLYNTGL 66

Query: 188 RFGGPIVMVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFASWLTG 9
            +GGP+ +VYGWF+A  FT+IV  SMAEICSS+PTSGGLYYWSAKLAGP+WAPFASW+TG
Sbjct: 67  NYGGPVSLVYGWFLASAFTMIVALSMAEICSSYPTSGGLYYWSAKLAGPRWAPFASWITG 126

Query: 8   WF 3
           WF
Sbjct: 127 WF 128


>ref|XP_004167449.1| PREDICTED: amino-acid permease BAT1-like [Cucumis sativus]
          Length = 513

 Score =  176 bits (447), Expect = 2e-42
 Identities = 80/110 (72%), Positives = 90/110 (81%)
 Frame = -3

Query: 332 VDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGLRFGGPIVMVYGW 153
           +D+G +RLN+LGYKQELKRDL             SVLTG+TTLYN GL FGGP+ +VYGW
Sbjct: 10  LDTGHARLNELGYKQELKRDLSVVSNFAFSFSIISVLTGITTLYNNGLNFGGPVSLVYGW 69

Query: 152 FIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFASWLTGWF 3
           FIAGFFT+ VG SMAEICSS+PTSGGLYYWSAKLAGP WAPFASW+TGWF
Sbjct: 70  FIAGFFTMFVGLSMAEICSSYPTSGGLYYWSAKLAGPNWAPFASWMTGWF 119


>ref|XP_002526293.1| GABA-specific permease, putative [Ricinus communis]
           gi|223534374|gb|EEF36082.1| GABA-specific permease,
           putative [Ricinus communis]
          Length = 528

 Score =  175 bits (443), Expect = 6e-42
 Identities = 81/115 (70%), Positives = 90/115 (78%)
 Frame = -3

Query: 347 NGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLYNTGLRFGGPIV 168
           NG    DSG +RL +LGYKQELKRDL             SVLTG+TTLYNTGL FGGP+ 
Sbjct: 20  NGKVNSDSGAARLQELGYKQELKRDLSVFSNFAFSFSIISVLTGITTLYNTGLNFGGPVS 79

Query: 167 MVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFASWLTGWF 3
           + YGWFIAG FT+ VG +MAEICSSFPTSGGLYYWSAKLAGP+WAPFASW+TGWF
Sbjct: 80  LQYGWFIAGLFTMFVGLAMAEICSSFPTSGGLYYWSAKLAGPRWAPFASWITGWF 134


>emb|CBI26962.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score =  174 bits (440), Expect = 1e-41
 Identities = 86/126 (68%), Positives = 97/126 (76%)
 Frame = -3

Query: 380 REVMPISSHVPNGGAAVDSGQSRLNQLGYKQELKRDLXXXXXXXXXXXXXSVLTGVTTLY 201
           R    + S V +G A  DSGQSRL+QLGYKQELKRDL             SV+TGVTTLY
Sbjct: 5   RSERSLPSQVEDGIA--DSGQSRLSQLGYKQELKRDLSVVSNFAFSFSIISVITGVTTLY 62

Query: 200 NTGLRFGGPIVMVYGWFIAGFFTLIVGYSMAEICSSFPTSGGLYYWSAKLAGPKWAPFAS 21
           N+GL  GGP+VMVYGW IAG F+++VG SMAEICSS+PTSGGLYYWSAKLAGP WAPFAS
Sbjct: 63  NSGLTNGGPVVMVYGWLIAGGFSMLVGLSMAEICSSYPTSGGLYYWSAKLAGPSWAPFAS 122

Query: 20  WLTGWF 3
           W+TGWF
Sbjct: 123 WMTGWF 128


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