BLASTX nr result

ID: Coptis24_contig00028211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028211
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525187.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    74   2e-11
sp|Q9MUK5.1|TOC64_PEA RecName: Full=Translocon at the outer memb...    72   6e-11
ref|XP_003530960.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    72   6e-11
ref|XP_002322105.1| amidase family protein [Populus trichocarpa]...    70   2e-10
ref|XP_003631114.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...    70   4e-10

>ref|XP_003525187.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
           [Glycine max]
          Length = 587

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 35/43 (81%), Positives = 37/43 (86%)
 Frame = +2

Query: 80  GIDTTGGVRVPAAFCGILGFRTSHGALFKIGIIPISPSLDAVG 208
           GIDTTGGVRVPA FCGILGFR SHGA+  +GIIPIS SLD VG
Sbjct: 158 GIDTTGGVRVPAGFCGILGFRPSHGAVSHMGIIPISTSLDTVG 200


>sp|Q9MUK5.1|TOC64_PEA RecName: Full=Translocon at the outer membrane of chloroplasts 64
           gi|7453538|gb|AAF62870.1|AF179282_1 Toc64 [Pisum
           sativum]
          Length = 593

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +2

Query: 80  GIDTTGGVRVPAAFCGILGFRTSHGALFKIGIIPISPSLDAVG 208
           G+DT+GGVRVPA FCGILGFR SHGA+  +GIIP+S SLD VG
Sbjct: 164 GVDTSGGVRVPAGFCGILGFRPSHGAVSHVGIIPVSTSLDTVG 206


>ref|XP_003530960.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A-like
           [Glycine max]
          Length = 591

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 34/43 (79%), Positives = 36/43 (83%)
 Frame = +2

Query: 80  GIDTTGGVRVPAAFCGILGFRTSHGALFKIGIIPISPSLDAVG 208
           GIDT GGVRVPA FCGILGFR SHGA+  +GIIPIS SLD VG
Sbjct: 162 GIDTVGGVRVPAGFCGILGFRPSHGAVSHLGIIPISTSLDTVG 204


>ref|XP_002322105.1| amidase family protein [Populus trichocarpa]
           gi|222869101|gb|EEF06232.1| amidase family protein
           [Populus trichocarpa]
          Length = 592

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = +2

Query: 80  GIDTTGGVRVPAAFCGILGFRTSHGALFKIGIIPISPSLDAVG 208
           G+DT GGVRVPA FCGI+GFR S+GA+ KIG++P+S SLD VG
Sbjct: 161 GVDTVGGVRVPAGFCGIIGFRPSYGAISKIGVLPVSVSLDTVG 203


>ref|XP_003631114.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
           gi|355525136|gb|AET05590.1| Glutamyl-tRNA(Gln)
           amidotransferase subunit A [Medicago truncatula]
          Length = 594

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/43 (74%), Positives = 36/43 (83%)
 Frame = +2

Query: 80  GIDTTGGVRVPAAFCGILGFRTSHGALFKIGIIPISPSLDAVG 208
           G+DT+GGVRVPA FCGILGFR SHGA+   GIIP+S SLD VG
Sbjct: 166 GVDTSGGVRVPAGFCGILGFRPSHGAVSHGGIIPVSTSLDTVG 208


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