BLASTX nr result

ID: Coptis24_contig00028192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028192
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277338.2| PREDICTED: heat stress transcription factor ...    85   9e-21
gb|AFK49315.1| unknown [Lotus japonicus]                               84   1e-20
gb|ACU20358.1| unknown [Glycine max]                                   85   1e-20
emb|CBI30247.3| unnamed protein product [Vitis vinifera]               81   1e-19
ref|XP_003520683.1| PREDICTED: heat stress transcription factor ...    80   3e-19

>ref|XP_002277338.2| PREDICTED: heat stress transcription factor A-3-like [Vitis
           vinifera]
          Length = 556

 Score = 84.7 bits (208), Expect(2) = 9e-21
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = -3

Query: 229 ISWGSTGQSFVVWDHVEFSKSIIPRNFKHNNFSSFVRQLNTYVG 98
           +SWG TG+SFVVWD VEFS+ ++PRNFKHNNFSSFVRQLNTYVG
Sbjct: 138 VSWGPTGESFVVWDPVEFSRLVLPRNFKHNNFSSFVRQLNTYVG 181



 Score = 41.2 bits (95), Expect(2) = 9e-21
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -2

Query: 377 IPVSSEGETNSNIIGVVVPQPLECLQGTPVPAFLCKTF 264
           + V++E E  +  IG   PQPL+CLQ  P+P FL KTF
Sbjct: 91  VGVAAEAEAEAEEIGA--PQPLDCLQDNPIPPFLSKTF 126


>gb|AFK49315.1| unknown [Lotus japonicus]
          Length = 167

 Score = 84.0 bits (206), Expect(2) = 1e-20
 Identities = 39/58 (67%), Positives = 47/58 (81%)
 Frame = -3

Query: 229 ISWGSTGQSFVVWDHVEFSKSIIPRNFKHNNFSSFVRQLNTYVGTTCNQPVMAAVICM 56
           ISWGS G SFVVWD +EFS+ ++PR+FKHNNFSSFVRQLNTYVG    QP+MA  + +
Sbjct: 112 ISWGSNGVSFVVWDPLEFSRLVLPRHFKHNNFSSFVRQLNTYVGIM--QPLMANAVSL 167



 Score = 41.6 bits (96), Expect(2) = 1e-20
 Identities = 22/37 (59%), Positives = 23/37 (62%)
 Frame = -2

Query: 374 PVSSEGETNSNIIGVVVPQPLECLQGTPVPAFLCKTF 264
           P S E ET     G  VP P+ CLQGTPVP FL KTF
Sbjct: 68  PSSMESETG----GGSVPVPMGCLQGTPVPPFLSKTF 100


>gb|ACU20358.1| unknown [Glycine max]
          Length = 113

 Score = 85.1 bits (209), Expect(2) = 1e-20
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = -3

Query: 229 ISWGSTGQSFVVWDHVEFSKSIIPRNFKHNNFSSFVRQLNTYVGTTC 89
           ISWGSTG SFVVWD   F++ ++PRNFKHNNFSSFVRQLNTYVGT C
Sbjct: 57  ISWGSTGVSFVVWDPTLFARHVLPRNFKHNNFSSFVRQLNTYVGTLC 103



 Score = 40.4 bits (93), Expect(2) = 1e-20
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = -2

Query: 401 SNSPPGNVIPVSSEGETNSNIIGVVVPQPLECLQGTPVPAFLCKTF 264
           ++SP  + +P SS      N +     +PLECLQG PVPAFL KTF
Sbjct: 2   NSSPSSSQLPSSSADFDKFNSLPRF--RPLECLQGNPVPAFLSKTF 45


>emb|CBI30247.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 80.9 bits (198), Expect(2) = 1e-19
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = -3

Query: 229 ISWGSTGQSFVVWDHVEFSKSIIPRNFKHNNFSSFVRQLNTY 104
           +SWG TG+SFVVWD VEFS+ ++PRNFKHNNFSSFVRQLNTY
Sbjct: 117 VSWGPTGESFVVWDPVEFSRLVLPRNFKHNNFSSFVRQLNTY 158



 Score = 41.2 bits (95), Expect(2) = 1e-19
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -2

Query: 377 IPVSSEGETNSNIIGVVVPQPLECLQGTPVPAFLCKTF 264
           + V++E E  +  IG   PQPL+CLQ  P+P FL KTF
Sbjct: 70  VGVAAEAEAEAEEIGA--PQPLDCLQDNPIPPFLSKTF 105


>ref|XP_003520683.1| PREDICTED: heat stress transcription factor A-3-like [Glycine max]
          Length = 427

 Score = 80.1 bits (196), Expect(2) = 3e-19
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = -3

Query: 229 ISWGSTGQSFVVWDHVEFSKSIIPRNFKHNNFSSFVRQLNTYVG 98
           ISWGSTG SFVVWD   F++ ++PRNFKHNNFSSFVRQLNTYVG
Sbjct: 57  ISWGSTGVSFVVWDPTLFARHVLPRNFKHNNFSSFVRQLNTYVG 100



 Score = 40.4 bits (93), Expect(2) = 3e-19
 Identities = 22/46 (47%), Positives = 28/46 (60%)
 Frame = -2

Query: 401 SNSPPGNVIPVSSEGETNSNIIGVVVPQPLECLQGTPVPAFLCKTF 264
           ++SP  + +P SS      N +     +PLECLQG PVPAFL KTF
Sbjct: 2   NSSPSSSQLPSSSADFDKFNSLPRF--RPLECLQGNPVPAFLSKTF 45


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