BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028172
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    62   1e-07
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-07
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    59   8e-07
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    59   1e-06
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    58   1e-06

>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = +1

Query: 154  VKLNVDGASSGNPGPAGVGCRNASGGFEFVYSSNIGIATNFIAECTTIQEGIETALNRGK 333
            +K+N DG+  G     G   R++SG F   +S NIG+A+ F AE       +E A + G 
Sbjct: 1023 LKVNTDGSVVGGLAACGGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAHHGW 1082

Query: 334  TAIWVESDSTTAVAAF-NFDKIPWQLKGRWREVK 432
              +W+ESDST+A+  F N   + W L+ RW   +
Sbjct: 1083 RNLWLESDSTSALMIFSNSSLVQWLLRNRWHNAQ 1116


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +1

Query: 154 VKLNVDGASSGNPGPAGVG--CRNASGGFEFVYSSNIGIATNFIAECTTIQEGIETALNR 327
           +KLNVDG S GNPG AG G   R+  G +   ++ NIGI ++  AE   +  G++ A +R
Sbjct: 84  IKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDR 143

Query: 328 GKTAIWVESDSTTAVAAFNFDKI 396
           G   + +ESDS   V   N D +
Sbjct: 144 GFRKVDLESDSKVVVGLINGDSV 166


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = +1

Query: 154 VKLNVDGASSGNPGPAGVG--CRNASGGFEFVYSSNIGIATNFIAECTTIQEGIETALNR 327
           +KLNVDG S GNPG AG G   R+  G +   ++ NIGI ++  AE   +  G++ A +R
Sbjct: 84  IKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDR 143

Query: 328 GKTAIWVESDSTTAVAAFNFDKI 396
           G   + +ESDS   V   N D +
Sbjct: 144 GFRKVDLESDSKVVVGLINGDSV 166


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
 Frame = +1

Query: 154 VKLNVDGASSGNPGPAGVGCRNASGGFEFVYSSNIGIATNFIAECTTIQEGIETALNRGK 333
           +K N DGAS+      G   R+ +  F   ++ N+G  + +  E   I   +E A  R  
Sbjct: 233 IKFNTDGASTATSSSCGGVFRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQRNW 292

Query: 334 TAIWVESDSTTAVAAF-NFDKIPWQLKGRWREVKTKMTTCR----ITSAWREIN 480
             IW+ESDS   V AF     IP +L+ RW  +  +   CR    IT  +RE N
Sbjct: 293 RNIWIESDSALVVMAFKKMSMIPCRLRNRW--INCRKLLCRMNFVITHIYREDN 344


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
 Frame = +1

Query: 154 VKLNVDGASSGNP--GPAGVGCRNASGGFEFVYSSNIGIATNFIAECTTIQEGIETALNR 327
           +K+N DG+  G+P  G  GV  R +   F   ++ NIG AT   AE +     IE A   
Sbjct: 253 MKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKEL 312

Query: 328 GKTAIWVESDSTTAVAAFNFDK-IPWQLKGRW 420
             T IW+E+DS   + AF+F+  +PW++  RW
Sbjct: 313 HLTNIWIETDSVNVIRAFHFNTGVPWKMHIRW 344