BLASTX nr result

ID: Coptis24_contig00028163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028163
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_16653004.1| hypothetical protein HMPREF9597_00208 [Propio...    82   5e-14
ref|ZP_16527378.1| hypothetical protein HMPREF9602_02259 [Propio...    82   5e-14
dbj|BAG46932.1| cell wall-associated hydrolase [Burkholderia mul...    78   9e-13
ref|ZP_16545981.1| hypothetical protein HMPREF9577_01514, partia...    76   3e-12
ref|ZP_16579161.1| hypothetical protein HMPREF9610_01193 [Propio...    76   3e-12

>ref|ZP_16653004.1| hypothetical protein HMPREF9597_00208 [Propionibacterium acnes
           HL005PA4] gi|314916672|gb|EFS80503.1| hypothetical
           protein HMPREF9597_00208 [Propionibacterium acnes
           HL005PA4]
          Length = 202

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -1

Query: 223 GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH 110
           GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH
Sbjct: 165 GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH 202


>ref|ZP_16527378.1| hypothetical protein HMPREF9602_02259 [Propionibacterium acnes
           HL030PA2] gi|422510964|ref|ZP_16587109.1| hypothetical
           protein HMPREF9589_01467 [Propionibacterium acnes
           HL059PA1] gi|422544914|ref|ZP_16620746.1| hypothetical
           protein HMPREF9618_01608 [Propionibacterium acnes
           HL082PA1] gi|313815718|gb|EFS53432.1| hypothetical
           protein HMPREF9589_01467 [Propionibacterium acnes
           HL059PA1] gi|314963296|gb|EFT07396.1| hypothetical
           protein HMPREF9618_01608 [Propionibacterium acnes
           HL082PA1] gi|315109668|gb|EFT81644.1| hypothetical
           protein HMPREF9602_02259 [Propionibacterium acnes
           HL030PA2]
          Length = 124

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -1

Query: 223 GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH 110
           GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH
Sbjct: 87  GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH 124


>dbj|BAG46932.1| cell wall-associated hydrolase [Burkholderia multivorans ATCC
           17616]
          Length = 234

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/63 (60%), Positives = 44/63 (69%)
 Frame = -3

Query: 221 RPPQSNYPSGTVLEPDHGPQ*DNQNNQSGISPTTPPPLAWPHQRLPPILHKPSQSPIPSY 42
           RPPQSN    TV +PDHGP+ + Q NQ GIS T PP LA+    LPPILH+  QSP+ SY
Sbjct: 166 RPPQSNCLPCTVPDPDHGPRLEPQTNQGGISRTAPPKLAFRFHSLPPILHRSVQSPMQSY 225

Query: 41  SKG 33
           SKG
Sbjct: 226 SKG 228


>ref|ZP_16545981.1| hypothetical protein HMPREF9577_01514, partial [Propionibacterium
           acnes HL110PA3] gi|314981782|gb|EFT25875.1| hypothetical
           protein HMPREF9577_01514 [Propionibacterium acnes
           HL110PA3]
          Length = 47

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 119 ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA 223
           ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA
Sbjct: 12  ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA 46


>ref|ZP_16579161.1| hypothetical protein HMPREF9610_01193 [Propionibacterium acnes
           HL027PA2] gi|422517747|ref|ZP_16593837.1| hypothetical
           protein HMPREF9574_00585 [Propionibacterium acnes
           HL074PA1] gi|422548962|ref|ZP_16624767.1| hypothetical
           protein HMPREF9598_00517 [Propionibacterium acnes
           HL050PA1] gi|422559771|ref|ZP_16635491.1| hypothetical
           protein HMPREF9594_00979 [Propionibacterium acnes
           HL005PA1] gi|422574681|ref|ZP_16650231.1| hypothetical
           protein HMPREF9603_00002 [Propionibacterium acnes
           HL001PA1] gi|313773083|gb|EFS39049.1| hypothetical
           protein HMPREF9574_00585 [Propionibacterium acnes
           HL074PA1] gi|314918965|gb|EFS82796.1| hypothetical
           protein HMPREF9598_00517 [Propionibacterium acnes
           HL050PA1] gi|314924542|gb|EFS88373.1| hypothetical
           protein HMPREF9603_00002 [Propionibacterium acnes
           HL001PA1] gi|314984941|gb|EFT29033.1| hypothetical
           protein HMPREF9594_00979 [Propionibacterium acnes
           HL005PA1] gi|315083868|gb|EFT55844.1| hypothetical
           protein HMPREF9610_01193 [Propionibacterium acnes
           HL027PA2]
          Length = 48

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +2

Query: 119 ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA 223
           ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA
Sbjct: 13  ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA 47


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