BLASTX nr result
ID: Coptis24_contig00028163
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028163 (223 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_16653004.1| hypothetical protein HMPREF9597_00208 [Propio... 82 5e-14 ref|ZP_16527378.1| hypothetical protein HMPREF9602_02259 [Propio... 82 5e-14 dbj|BAG46932.1| cell wall-associated hydrolase [Burkholderia mul... 78 9e-13 ref|ZP_16545981.1| hypothetical protein HMPREF9577_01514, partia... 76 3e-12 ref|ZP_16579161.1| hypothetical protein HMPREF9610_01193 [Propio... 76 3e-12 >ref|ZP_16653004.1| hypothetical protein HMPREF9597_00208 [Propionibacterium acnes HL005PA4] gi|314916672|gb|EFS80503.1| hypothetical protein HMPREF9597_00208 [Propionibacterium acnes HL005PA4] Length = 202 Score = 82.0 bits (201), Expect = 5e-14 Identities = 38/38 (100%), Positives = 38/38 (100%) Frame = -1 Query: 223 GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH 110 GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH Sbjct: 165 GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH 202 >ref|ZP_16527378.1| hypothetical protein HMPREF9602_02259 [Propionibacterium acnes HL030PA2] gi|422510964|ref|ZP_16587109.1| hypothetical protein HMPREF9589_01467 [Propionibacterium acnes HL059PA1] gi|422544914|ref|ZP_16620746.1| hypothetical protein HMPREF9618_01608 [Propionibacterium acnes HL082PA1] gi|313815718|gb|EFS53432.1| hypothetical protein HMPREF9589_01467 [Propionibacterium acnes HL059PA1] gi|314963296|gb|EFT07396.1| hypothetical protein HMPREF9618_01608 [Propionibacterium acnes HL082PA1] gi|315109668|gb|EFT81644.1| hypothetical protein HMPREF9602_02259 [Propionibacterium acnes HL030PA2] Length = 124 Score = 82.0 bits (201), Expect = 5e-14 Identities = 38/38 (100%), Positives = 38/38 (100%) Frame = -1 Query: 223 GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH 110 GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH Sbjct: 87 GDRPSQTTHQALSLNRITVHSEITRTIRVVFHQRLHHH 124 >dbj|BAG46932.1| cell wall-associated hydrolase [Burkholderia multivorans ATCC 17616] Length = 234 Score = 77.8 bits (190), Expect = 9e-13 Identities = 38/63 (60%), Positives = 44/63 (69%) Frame = -3 Query: 221 RPPQSNYPSGTVLEPDHGPQ*DNQNNQSGISPTTPPPLAWPHQRLPPILHKPSQSPIPSY 42 RPPQSN TV +PDHGP+ + Q NQ GIS T PP LA+ LPPILH+ QSP+ SY Sbjct: 166 RPPQSNCLPCTVPDPDHGPRLEPQTNQGGISRTAPPKLAFRFHSLPPILHRSVQSPMQSY 225 Query: 41 SKG 33 SKG Sbjct: 226 SKG 228 >ref|ZP_16545981.1| hypothetical protein HMPREF9577_01514, partial [Propionibacterium acnes HL110PA3] gi|314981782|gb|EFT25875.1| hypothetical protein HMPREF9577_01514 [Propionibacterium acnes HL110PA3] Length = 47 Score = 75.9 bits (185), Expect = 3e-12 Identities = 35/35 (100%), Positives = 35/35 (100%) Frame = +2 Query: 119 ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA 223 ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA Sbjct: 12 ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA 46 >ref|ZP_16579161.1| hypothetical protein HMPREF9610_01193 [Propionibacterium acnes HL027PA2] gi|422517747|ref|ZP_16593837.1| hypothetical protein HMPREF9574_00585 [Propionibacterium acnes HL074PA1] gi|422548962|ref|ZP_16624767.1| hypothetical protein HMPREF9598_00517 [Propionibacterium acnes HL050PA1] gi|422559771|ref|ZP_16635491.1| hypothetical protein HMPREF9594_00979 [Propionibacterium acnes HL005PA1] gi|422574681|ref|ZP_16650231.1| hypothetical protein HMPREF9603_00002 [Propionibacterium acnes HL001PA1] gi|313773083|gb|EFS39049.1| hypothetical protein HMPREF9574_00585 [Propionibacterium acnes HL074PA1] gi|314918965|gb|EFS82796.1| hypothetical protein HMPREF9598_00517 [Propionibacterium acnes HL050PA1] gi|314924542|gb|EFS88373.1| hypothetical protein HMPREF9603_00002 [Propionibacterium acnes HL001PA1] gi|314984941|gb|EFT29033.1| hypothetical protein HMPREF9594_00979 [Propionibacterium acnes HL005PA1] gi|315083868|gb|EFT55844.1| hypothetical protein HMPREF9610_01193 [Propionibacterium acnes HL027PA2] Length = 48 Score = 75.9 bits (185), Expect = 3e-12 Identities = 35/35 (100%), Positives = 35/35 (100%) Frame = +2 Query: 119 ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA 223 ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA Sbjct: 13 ESLVKYHSDCSGYLTVDRDPVQGQCLMGSLTGAVA 47