BLASTX nr result

ID: Coptis24_contig00028160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028160
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36952.3| unnamed protein product [Vitis vinifera]              338   9e-91
ref|XP_002270567.2| PREDICTED: uncharacterized protein LOC100260...   336   4e-90
ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|2...   315   8e-84
gb|AFK44929.1| unknown [Lotus japonicus]                              310   3e-82
ref|XP_003520751.1| PREDICTED: uncharacterized protein LOC100790...   308   1e-81

>emb|CBI36952.3| unnamed protein product [Vitis vinifera]
          Length = 440

 Score =  338 bits (867), Expect = 9e-91
 Identities = 175/290 (60%), Positives = 208/290 (71%), Gaps = 7/290 (2%)
 Frame = -2

Query: 850 IFLFIFSLLVFQHTPSSLLPHVSNFQINTTTTSV------GFGRNVTVSIVKYPSLRDTT 689
           IFL  FS+ V    PS+     S   +N   T V      GF R  +   VK P + D  
Sbjct: 26  IFLCFFSIWVMTAVPSNARVQFSEPLVNLVPTPVNVETLSGFSRKNSGDGVKKPIVIDA- 84

Query: 688 HLTRLDNSTWGT-LDLVGKKQLLRNISEVEDGSTKFGNFSKRVEVLTSEKIEGKKSSECD 512
           HL + +N++    + +    Q   N SE    ST F    +++EV T ++IE KK+ EC 
Sbjct: 85  HLRKRENASGSARISVFEGIQRRDNESESVSNSTSF----EKIEVHTDQRIEEKKNRECA 140

Query: 511 VSHGRWVYDESYPLYTNRFCQLIDEGFSCEANGRPDRDYMKWRWQPYHCDLPRFNATKML 332
           +  GRWV+DESYPLYTN+ C  IDEGF C  NGR D+DYMKWRWQP  CD+PRFNA++ML
Sbjct: 141 LWKGRWVFDESYPLYTNQSCPFIDEGFDCGGNGRLDKDYMKWRWQPQDCDIPRFNASRML 200

Query: 331 EMIRGKRLVFVGDSMNRNQWESMLCLLRSAIKDPKRVYETHGRRITKEKGNYSFKFLDYK 152
           E+IRGKRLVFVGDS+NRNQWESMLCLL  A KDPK+VYE HGR+ITKEKGNYSFKF+DYK
Sbjct: 201 ELIRGKRLVFVGDSINRNQWESMLCLLFGAAKDPKKVYERHGRKITKEKGNYSFKFVDYK 260

Query: 151 CTVEYYVTHFLVHEGKARVKQKRVQTLRIDAIDRSSSRWKGADILVFNTA 2
           CTVEYYV+HFLVHEGKARV QKRVQTLRID+IDR SSRW+GADI+VFNTA
Sbjct: 261 CTVEYYVSHFLVHEGKARVGQKRVQTLRIDSIDRGSSRWRGADIVVFNTA 310


>ref|XP_002270567.2| PREDICTED: uncharacterized protein LOC100260535 [Vitis vinifera]
          Length = 563

 Score =  336 bits (861), Expect = 4e-90
 Identities = 178/307 (57%), Positives = 212/307 (69%), Gaps = 24/307 (7%)
 Frame = -2

Query: 850  IFLFIFSLLVFQHTPSSLLPHVSNFQINTTTTSV------GFGRNVTVSIVKYPSLRDTT 689
            IFL  FS+ V    PS+     S   +N   T V      GF R  +   VK P + D  
Sbjct: 86   IFLCFFSIWVMTAVPSNARVQFSEPLVNLVPTPVNVETLSGFSRKNSGDGVKKPIVIDA- 144

Query: 688  HLTRLDNSTWGT-LDLVGKKQLLRNISEVEDGSTKF-----GNFS------------KRV 563
            HL + +N++    + +    Q   N SEV D  T       GNF+            +++
Sbjct: 145  HLRKRENASGSARISVFEGIQRRDNESEVSDEDTNKNGAVDGNFTTGQESVSNSTSFEKI 204

Query: 562  EVLTSEKIEGKKSSECDVSHGRWVYDESYPLYTNRFCQLIDEGFSCEANGRPDRDYMKWR 383
            EV T ++IE KK+ EC +  GRWV+DESYPLYTN+ C  IDEGF C  NGR D+DYMKWR
Sbjct: 205  EVHTDQRIEEKKNRECALWKGRWVFDESYPLYTNQSCPFIDEGFDCGGNGRLDKDYMKWR 264

Query: 382  WQPYHCDLPRFNATKMLEMIRGKRLVFVGDSMNRNQWESMLCLLRSAIKDPKRVYETHGR 203
            WQP  CD+PRFNA++MLE+IRGKRLVFVGDS+NRNQWESMLCLL  A KDPK+VYE HGR
Sbjct: 265  WQPQDCDIPRFNASRMLELIRGKRLVFVGDSINRNQWESMLCLLFGAAKDPKKVYERHGR 324

Query: 202  RITKEKGNYSFKFLDYKCTVEYYVTHFLVHEGKARVKQKRVQTLRIDAIDRSSSRWKGAD 23
            +ITKEKGNYSFKF+DYKCTVEYYV+HFLVHEGKARV QKRVQTLRID+IDR SSRW+GAD
Sbjct: 325  KITKEKGNYSFKFVDYKCTVEYYVSHFLVHEGKARVGQKRVQTLRIDSIDRGSSRWRGAD 384

Query: 22   ILVFNTA 2
            I+VFNTA
Sbjct: 385  IVVFNTA 391


>ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|222843239|gb|EEE80786.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  315 bits (807), Expect = 8e-84
 Identities = 167/300 (55%), Positives = 203/300 (67%), Gaps = 18/300 (6%)
 Frame = -2

Query: 847 FLFIFSLLVFQHTPSSLLPHVSNFQINTTTTSVGFGR-----------NVTVSIVKYPSL 701
           FL  F++ V + TPS L    +NF++N T+                  N + S VK    
Sbjct: 26  FLVFFTIWVSKSTPSIL--QETNFELNKTSLVASLKPLSVQPFSDLTINSSSSDVKSSIF 83

Query: 700 RDTTHLTRLDN-STWGTLDLVGKKQLLRNISEVEDGSTKFGNFSKRVEVLTSEKIEGKKS 524
            DT H    +N S + ++  + + Q   NI+E   G+       ++ E    E I  KK 
Sbjct: 84  VDT-HFREPENISGFASISRI-EVQSSENIAEETRGAAS----QEKNEAPNKEGIRKKKK 137

Query: 523 S------ECDVSHGRWVYDESYPLYTNRFCQLIDEGFSCEANGRPDRDYMKWRWQPYHCD 362
                  ECDV+ GRW+YDE+YPLYTN  C  IDEGF C  NGR D+DYMKWRWQP  C+
Sbjct: 138 GPISSMRECDVTKGRWIYDENYPLYTNSSCPFIDEGFDCVGNGRLDKDYMKWRWQPQDCN 197

Query: 361 LPRFNATKMLEMIRGKRLVFVGDSMNRNQWESMLCLLRSAIKDPKRVYETHGRRITKEKG 182
           + RFNATKML++IRGKRLVFVGDS+NRNQWESMLC+L  A+KDPK+VYETHGRRITKEKG
Sbjct: 198 ISRFNATKMLDLIRGKRLVFVGDSINRNQWESMLCMLMGAVKDPKKVYETHGRRITKEKG 257

Query: 181 NYSFKFLDYKCTVEYYVTHFLVHEGKARVKQKRVQTLRIDAIDRSSSRWKGADILVFNTA 2
           NYSFKF+DYKCTVEYYV+HFLVHE KAR+  +RVQTLRIDAID  SSRW+GADIL+FNTA
Sbjct: 258 NYSFKFVDYKCTVEYYVSHFLVHESKARIGSRRVQTLRIDAIDHGSSRWRGADILIFNTA 317


>gb|AFK44929.1| unknown [Lotus japonicus]
          Length = 502

 Score =  310 bits (793), Expect = 3e-82
 Identities = 169/317 (53%), Positives = 202/317 (63%), Gaps = 34/317 (10%)
 Frame = -2

Query: 850 IFLFIFSLLVFQHTPSSLLPHVSNFQINTTTTS------------VGFGRNVTVSIVKYP 707
           +FL  F++ + + T SSL  H +    N++++S             GF +N TV+ V+ P
Sbjct: 26  LFLSTFTIWLSKST-SSLHHHHTPLHFNSSSSSDGDTVGDNFQSLTGFTQNFTVTAVRIP 84

Query: 706 SLRDTTHLTRLDNSTWGTLD---------LVGKKQLLRNISEVEDGST----KFGNFSKR 566
           +L D   L R   S  G                     N + ++D  T    +F    K+
Sbjct: 85  TLIDN-RLARTQKSLSGFKSEASGHHADAATAAANATLNFTSMQDSGTSPGERFSEEQKK 143

Query: 565 VE---------VLTSEKIEGKKSSECDVSHGRWVYDESYPLYTNRFCQLIDEGFSCEANG 413
           VE         V    K E +    CD+++G WV+DESYPLY    C  IDEGF CE NG
Sbjct: 144 VEAASLFEKTQVPVLNKAEKETVKGCDLANGYWVFDESYPLYARDSCPFIDEGFDCEGNG 203

Query: 412 RPDRDYMKWRWQPYHCDLPRFNATKMLEMIRGKRLVFVGDSMNRNQWESMLCLLRSAIKD 233
           R DR+Y KWRWQP  CDLPRFNATKMLEMIRGKRLVFVGDS+NRNQWESMLC+L  A+KD
Sbjct: 204 RLDRNYSKWRWQPRECDLPRFNATKMLEMIRGKRLVFVGDSINRNQWESMLCMLFGAVKD 263

Query: 232 PKRVYETHGRRITKEKGNYSFKFLDYKCTVEYYVTHFLVHEGKARVKQKRVQTLRIDAID 53
           PKRVYE  GR+ITKEKGNYSF+FLDY+CTVEYYV+HFLVHE KARV QKR  TLRIDAID
Sbjct: 264 PKRVYEARGRKITKEKGNYSFRFLDYQCTVEYYVSHFLVHESKARVGQKRRPTLRIDAID 323

Query: 52  RSSSRWKGADILVFNTA 2
             SSRW+GADILVFNTA
Sbjct: 324 HGSSRWRGADILVFNTA 340


>ref|XP_003520751.1| PREDICTED: uncharacterized protein LOC100790898 [Glycine max]
          Length = 502

 Score =  308 bits (788), Expect = 1e-81
 Identities = 169/318 (53%), Positives = 207/318 (65%), Gaps = 35/318 (11%)
 Frame = -2

Query: 850 IFLFIFSLLVFQHTPSSLLPHVSNFQINTTTTSVGFG----------------RNVTVSI 719
           +FL  F+  +  +TPS        F  +T+++SVG G                +N+TV++
Sbjct: 26  LFLSTFTTWLTNYTPSIHQQIHLYFNTSTSSSSVGDGESDSVALPPLTVHSLTKNLTVNV 85

Query: 718 VKYPSLRDTTHLTRLDNSTWGTLDL-----VGKKQLLRNISEVEDGSTK----------- 587
           VK P+L D   L R   S  G+        VG   +  N + +E+  T            
Sbjct: 86  VKVPTLIDN-RLARTQKSLSGSKSEPVRHHVGASNV--NFTSMEEYGTSPERVPSKEEKK 142

Query: 586 --FGNFSKRVEVLTSEKIEGKKSSE-CDVSHGRWVYDESYPLYTNRFCQLIDEGFSCEAN 416
              G+   + +V   +KIE KK  E CD++ G WV+DESYPLY+   C  IDEGF CE N
Sbjct: 143 VVAGDLVGKTQVPILKKIEQKKRVEGCDLTKGYWVFDESYPLYSKVSCPFIDEGFDCEGN 202

Query: 415 GRPDRDYMKWRWQPYHCDLPRFNATKMLEMIRGKRLVFVGDSMNRNQWESMLCLLRSAIK 236
           GR +R Y KWRWQP  CDLPRFNATKMLE+IRGKRLVFVGDS+NRNQWESMLC+L  AIK
Sbjct: 203 GRLNRSYTKWRWQPKGCDLPRFNATKMLELIRGKRLVFVGDSINRNQWESMLCMLLGAIK 262

Query: 235 DPKRVYETHGRRITKEKGNYSFKFLDYKCTVEYYVTHFLVHEGKARVKQKRVQTLRIDAI 56
           DP RVYE+ GR+ITKEKGNYSF+FLDY+CTVEYYV+HFLVHE KAR+ QKR  TLRIDAI
Sbjct: 263 DPTRVYESRGRKITKEKGNYSFRFLDYQCTVEYYVSHFLVHESKARIGQKRRSTLRIDAI 322

Query: 55  DRSSSRWKGADILVFNTA 2
           D  SSRW+GADI+VFNTA
Sbjct: 323 DHGSSRWRGADIVVFNTA 340


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