BLASTX nr result

ID: Coptis24_contig00028145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028145
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312824.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|XP_002523822.1| conserved hypothetical protein [Ricinus comm...    91   8e-17
ref|XP_002273863.2| PREDICTED: uncharacterized protein LOC100243...    86   2e-15
ref|XP_004172552.1| PREDICTED: uncharacterized protein LOC101230...    84   2e-14
ref|XP_004139585.1| PREDICTED: uncharacterized protein LOC101210...    84   2e-14

>ref|XP_002312824.1| predicted protein [Populus trichocarpa] gi|222849232|gb|EEE86779.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 60/141 (42%), Positives = 77/141 (54%), Gaps = 6/141 (4%)
 Frame = +3

Query: 105 MASCDHSLQQLFENPMPENATFIESLTTWNHIKSRQAMEISSFSEIFGELHFKXXXXXXX 284
           MA+C   LQ +FE P+PEN T +ESL++WN IK  + ME SS +EIFGELHFK       
Sbjct: 1   MAACGR-LQHIFEKPLPENPTLLESLSSWNQIKPVKPMEPSSLTEIFGELHFK----EDP 55

Query: 285 XXXXXXXXXXXXXXDLNPQ---PEIDKSTDQEYNKSPS---SHPLFSAQKNKKMDCSKKR 446
                         DLN +     +DK+   E  KSPS   S    + + ++   C K  
Sbjct: 56  QTPSSSLLATSSFLDLNSEARTTRLDKNDSVEVKKSPSILDSVSSTALKNHQYTGCHKNG 115

Query: 447 DDFSPRNSGSLQMCTEGLGFE 509
           D+FS  N  SLQ+CTEGLGFE
Sbjct: 116 DNFSRMNYESLQLCTEGLGFE 136


>ref|XP_002523822.1| conserved hypothetical protein [Ricinus communis]
           gi|223536910|gb|EEF38548.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 291

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 60/149 (40%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
 Frame = +3

Query: 105 MASCDHSLQQLFENPMPENATFIESLTTWNHIKSRQAMEISSFSEIFGELHFK------X 266
           MA+C  SLQ +FE P+PE  T +ESL++WN IK+ + +E SSF+EIFGELHFK       
Sbjct: 1   MAACG-SLQHIFEKPLPETPTLLESLSSWNPIKTIKPIEQSSFTEIFGELHFKENSESSS 59

Query: 267 XXXXXXXXXXXXXXXXXXXXDLNPQPEIDKSTDQE-------YNKSPSSHPLFSAQKN-K 422
                                L P+ E       +         KS S   L S  KN +
Sbjct: 60  SSPSFPIPSFSSSSPSSSFIGLIPEAETSNLNRNDSFDSGCHTKKSTSLDSLLSTPKNYQ 119

Query: 423 KMDCSKKRDDFSPRNSGSLQMCTEGLGFE 509
              C +  D FSPRN  SLQ+CTEGLGFE
Sbjct: 120 YAGCHRNGDSFSPRNYESLQLCTEGLGFE 148


>ref|XP_002273863.2| PREDICTED: uncharacterized protein LOC100243219 [Vitis vinifera]
          Length = 813

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 59/154 (38%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
 Frame = +3

Query: 105 MASCDHSLQQLFENPMPENATFIESLTTWNHIKSRQAMEISSFSEIFGELHFK------- 263
           MA+C  SLQ +FE P+PEN T +++L++WN IKS +  E  SF+EIFGELHFK       
Sbjct: 506 MAACG-SLQHIFEKPLPENPTLMDTLSSWNQIKSMKPPEQPSFTEIFGELHFKENSELLS 564

Query: 264 --------XXXXXXXXXXXXXXXXXXXXXDLNPQPEIDKSTD----QEYNKSPSSHPLFS 407
                                        D NPQ  I+K+ +     E NK P  +P  S
Sbjct: 565 SSSYLSSPHPPTSSSSSSLSSTSSTSSLIDFNPQLRIEKNENWGEKGEENKGP-LNPYVS 623

Query: 408 AQKNKKMDCSKKRDDFSPRNSGSLQMCTEGLGFE 509
             +N         D FS   S SLQ+CTEGLGFE
Sbjct: 624 RHRNS--------DSFSSMKSESLQLCTEGLGFE 649


>ref|XP_004172552.1| PREDICTED: uncharacterized protein LOC101230459 [Cucumis sativus]
          Length = 153

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 53/135 (39%), Positives = 70/135 (51%)
 Frame = +3

Query: 105 MASCDHSLQQLFENPMPENATFIESLTTWNHIKSRQAMEISSFSEIFGELHFKXXXXXXX 284
           MA+C  SLQ +FENP+PEN+T  E L++WN I   +  E SSF+EIFGELHFK       
Sbjct: 1   MAACG-SLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFK------- 52

Query: 285 XXXXXXXXXXXXXXDLNPQPEIDKSTDQEYNKSPSSHPLFSAQKNKKMDCSKKRDDFSPR 464
                          L        + D  + K PSS+      + +     +K + FS  
Sbjct: 53  --ESFVPHSFSSLSSLTESSNSPSAVDDIW-KEPSSN-----GEREPSSFHRKSNSFSST 104

Query: 465 NSGSLQMCTEGLGFE 509
           NS SLQ+CTEGLG+E
Sbjct: 105 NSESLQLCTEGLGYE 119


>ref|XP_004139585.1| PREDICTED: uncharacterized protein LOC101210424 [Cucumis sativus]
          Length = 256

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 53/135 (39%), Positives = 70/135 (51%)
 Frame = +3

Query: 105 MASCDHSLQQLFENPMPENATFIESLTTWNHIKSRQAMEISSFSEIFGELHFKXXXXXXX 284
           MA+C  SLQ +FENP+PEN+T  E L++WN I   +  E SSF+EIFGELHFK       
Sbjct: 1   MAACG-SLQHIFENPLPENSTLFEHLSSWNQIMPLKPTEPSSFTEIFGELHFK------- 52

Query: 285 XXXXXXXXXXXXXXDLNPQPEIDKSTDQEYNKSPSSHPLFSAQKNKKMDCSKKRDDFSPR 464
                          L        + D  + K PSS+      + +     +K + FS  
Sbjct: 53  --ESFVPHSFSSLSSLTESSNSPSAVDDIW-KEPSSN-----GEREPSSFHRKSNSFSST 104

Query: 465 NSGSLQMCTEGLGFE 509
           NS SLQ+CTEGLG+E
Sbjct: 105 NSESLQLCTEGLGYE 119


Top