BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028137
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   180   1e-43
ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   180   1e-43
emb|CBI32131.3| unnamed protein product [Vitis vinifera]              177   6e-43
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   177   6e-43
gb|ACL53449.1| unknown [Zea mays]                                     177   6e-43

>ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score =  180 bits (456), Expect = 1e-43
 Identities = 95/163 (58%), Positives = 117/163 (71%)
 Frame = -3

Query: 489 DRVLDLNFAKNKVLDFFESRMKYIAPNLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQL 310
           DR LDL+ AK KVLDF ESRM YIAPNLS++VGSAVAAKL+G+ GGL +L  MPA N+QL
Sbjct: 195 DRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQL 254

Query: 309 LGAKRRTLSGFSSANSESHVGFFQETAVVQHTPPPLKHGACKLFAYKSILAARVDLARGD 130
           LGAK++ L+GFS+A S+  VG+ ++T + Q TPP L+  AC+L A KS LAARVD  RGD
Sbjct: 255 LGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAKSTLAARVDSIRGD 314

Query: 129 GTGNIGRKYRDEISKKIENWQERXXXXXXXXXXXPDLTSKPKK 1
            +G  GR ++DEI KKIE WQE            PD  S+PKK
Sbjct: 315 PSGKTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPD--SEPKK 355


>ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score =  180 bits (456), Expect = 1e-43
 Identities = 95/163 (58%), Positives = 117/163 (71%)
 Frame = -3

Query: 489 DRVLDLNFAKNKVLDFFESRMKYIAPNLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQL 310
           DR LDL+ AK KVLDF ESRM YIAPNLS++VGSAVAAKL+G+ GGL +L  MPA N+QL
Sbjct: 195 DRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLASLAKMPACNVQL 254

Query: 309 LGAKRRTLSGFSSANSESHVGFFQETAVVQHTPPPLKHGACKLFAYKSILAARVDLARGD 130
           LGAK++ L+GFS+A S+  VG+ ++T + Q TPP L+  AC+L A KS LAARVD  RGD
Sbjct: 255 LGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRLLAAKSTLAARVDSIRGD 314

Query: 129 GTGNIGRKYRDEISKKIENWQERXXXXXXXXXXXPDLTSKPKK 1
            +G  GR ++DEI KKIE WQE            PD  S+PKK
Sbjct: 315 PSGKTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPD--SEPKK 355


>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  177 bits (450), Expect = 6e-43
 Identities = 95/163 (58%), Positives = 115/163 (70%)
 Frame = -3

Query: 489 DRVLDLNFAKNKVLDFFESRMKYIAPNLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQL 310
           DR L L+ AK KVLDF ESRM YIAPNLS++VGSAVAAKL+G+ GGL AL  MPA N+QL
Sbjct: 232 DRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQL 291

Query: 309 LGAKRRTLSGFSSANSESHVGFFQETAVVQHTPPPLKHGACKLFAYKSILAARVDLARGD 130
           LGAK++ L+GFS+A S+  VG+ ++T + Q TPP L+  AC+L A KS L+ARVD  RGD
Sbjct: 292 LGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKSTLSARVDSTRGD 351

Query: 129 GTGNIGRKYRDEISKKIENWQERXXXXXXXXXXXPDLTSKPKK 1
            TG  GR  R+EI KKIE WQE            PD  S+PKK
Sbjct: 352 PTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPD--SEPKK 392


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
           vinifera]
          Length = 489

 Score =  177 bits (450), Expect = 6e-43
 Identities = 95/163 (58%), Positives = 115/163 (70%)
 Frame = -3

Query: 489 DRVLDLNFAKNKVLDFFESRMKYIAPNLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQL 310
           DR L L+ AK KVLDF ESRM YIAPNLS++VGSAVAAKL+G+ GGL AL  MPA N+QL
Sbjct: 198 DRALALDLAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGLTALAKMPACNVQL 257

Query: 309 LGAKRRTLSGFSSANSESHVGFFQETAVVQHTPPPLKHGACKLFAYKSILAARVDLARGD 130
           LGAK++ L+GFS+A S+  VG+ ++T + Q TPP L+  AC+L A KS L+ARVD  RGD
Sbjct: 258 LGAKKKNLAGFSTATSQFRVGYIEQTEIFQSTPPSLRMRACRLLAAKSTLSARVDSTRGD 317

Query: 129 GTGNIGRKYRDEISKKIENWQERXXXXXXXXXXXPDLTSKPKK 1
            TG  GR  R+EI KKIE WQE            PD  S+PKK
Sbjct: 318 PTGKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPD--SEPKK 358


>gb|ACL53449.1| unknown [Zea mays]
          Length = 485

 Score =  177 bits (450), Expect = 6e-43
 Identities = 95/163 (58%), Positives = 115/163 (70%)
 Frame = -3

Query: 489 DRVLDLNFAKNKVLDFFESRMKYIAPNLSSLVGSAVAAKLIGSVGGLPALVNMPASNIQL 310
           DR L L+ +K KVLDF ESRM YIAPNLS++VGSAVA+KL+G+ GGL AL  MPA N+QL
Sbjct: 193 DRALTLDASKKKVLDFVESRMGYIAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQL 252

Query: 309 LGAKRRTLSGFSSANSESHVGFFQETAVVQHTPPPLKHGACKLFAYKSILAARVDLARGD 130
           LGAKR+ L+GFS+A S+  VG+ ++T V Q TPPPL+  AC+L A KS LAAR+D  RGD
Sbjct: 253 LGAKRKNLAGFSTATSQFRVGYLEQTEVFQSTPPPLRTRACRLIAAKSTLAARIDSIRGD 312

Query: 129 GTGNIGRKYRDEISKKIENWQERXXXXXXXXXXXPDLTSKPKK 1
            TG  GR   +EI KKIE WQE            PD  S+PKK
Sbjct: 313 PTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPD--SEPKK 353