BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028112
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...   104   7e-21
emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera]   102   4e-20
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                      100   1e-19
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                     100   2e-19
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                     100   2e-19

>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
           polyprotein from Arabidopsis arenosa [Arabidopsis
           thaliana]
          Length = 1194

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 20/143 (13%)
 Frame = +1

Query: 7   ASSSTGNSNTQDYFPNTQYN-SHASYYTSDYT-------------------PSSESQWIV 126
           A++  GNSN   Y  N + N SH S Y S  +                   P + + W++
Sbjct: 231 AANYKGNSNNNQYNNNNRNNKSHGSSYNSQQSIPASPFTPWQPRANAAIASPYNANNWLL 290

Query: 127 DTGATNHITADLNNLTLHHPYSGNDKVLVCDGQGLHIANTGSTTLHTPTSKFHLNDILHV 306
           D+GAT+HIT+DLNNL+LH PY+G + V + DG GL I++TGS  + TP+    L D+L+V
Sbjct: 291 DSGATHHITSDLNNLSLHQPYTGGEDVTIADGSGLSISHTGSALISTPSRSLALTDVLYV 350

Query: 307 PEISQNLLYVQKFIKDNNCSMIF 375
           P I +NL+ V +    N  S+ F
Sbjct: 351 PNIHKNLISVYRMCNANKVSVEF 373


>emb|CAN74166.1| hypothetical protein VITISV_007721 [Vitis vinifera]
          Length = 631

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/100 (46%), Positives = 74/100 (74%)
 Frame = +1

Query: 76  SYYTSDYTPSSESQWIVDTGATNHITADLNNLTLHHPYSGNDKVLVCDGQGLHIANTGST 255
           ++Y S YTPS  S W++D GA++H+T DL+NL++H PY+G+D +++ DG GL I +TGS+
Sbjct: 2   AHYAS-YTPSHTS-WLLDNGASHHVTTDLHNLSMHTPYNGSDDIMIGDGSGLSITHTGSS 59

Query: 256 TLHTPTSKFHLNDILHVPEISQNLLYVQKFIKDNNCSMIF 375
           +LHT  + F LN++L+VP + +NL+ + +F   NN S+ F
Sbjct: 60  SLHTTHNTFKLNNVLYVPTMKKNLISISQFGTSNNVSIEF 99


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/122 (39%), Positives = 77/122 (63%)
 Frame = +1

Query: 10  SSSTGNSNTQDYFPNTQYNSHASYYTSDYTPSSESQWIVDTGATNHITADLNNLTLHHPY 189
           S ++  S++  Y P   +   A+  ++  TP +   W++D+GAT+H+T+DLNNL LH PY
Sbjct: 302 SYASNQSSSSSYAP---WQPRANMVSA--TPYNSGNWLLDSGATHHLTSDLNNLALHQPY 356

Query: 190 SGNDKVLVCDGQGLHIANTGSTTLHTPTSKFHLNDILHVPEISQNLLYVQKFIKDNNCSM 369
           +G ++V + DG GL I+++GS  L TPT    L D+L+VP+I +NL+ V +    N  S+
Sbjct: 357 NGGEEVTIADGSGLPISHSGSALLPTPTRSLDLKDVLYVPDIQKNLISVYRMCNTNGVSV 416

Query: 370 IF 375
            F
Sbjct: 417 EF 418


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/93 (46%), Positives = 65/93 (69%)
 Frame = +1

Query: 97  TPSSESQWIVDTGATNHITADLNNLTLHHPYSGNDKVLVCDGQGLHIANTGSTTLHTPTS 276
           TP +   W++D+GAT+H+T+DLNNL LH PY+G+++V + DG GL I+++GS  L TPT 
Sbjct: 326 TPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSGSALLPTPTR 385

Query: 277 KFHLNDILHVPEISQNLLYVQKFIKDNNCSMIF 375
              L D+L+VP+I +NL+ V +    N  S+ F
Sbjct: 386 SLALKDVLYVPDIQKNLISVYRMCNTNGVSVEF 418


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/93 (46%), Positives = 65/93 (69%)
 Frame = +1

Query: 97  TPSSESQWIVDTGATNHITADLNNLTLHHPYSGNDKVLVCDGQGLHIANTGSTTLHTPTS 276
           TP +   W++D+GAT+H+T+DLNNL LH PY+G+++V + DG GL I+++GS  L TPT 
Sbjct: 326 TPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSGSALLPTPTR 385

Query: 277 KFHLNDILHVPEISQNLLYVQKFIKDNNCSMIF 375
              L D+L+VP+I +NL+ V +    N  S+ F
Sbjct: 386 SLALKDVLYVPDIQKNLISVYRMCNTNGVSVEF 418