BLASTX nr result

ID: Coptis24_contig00028102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028102
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38918.1| unknown [Medicago truncatula]                          122   4e-26
ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-l...   119   2e-25
emb|CBI20214.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [...   115   3e-24
ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichoc...   114   1e-23

>gb|AFK38918.1| unknown [Medicago truncatula]
          Length = 279

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/96 (63%), Positives = 75/96 (78%), Gaps = 2/96 (2%)
 Frame = -1

Query: 287 VKAGDPKAHHVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGA--VNSLDV 114
           VKAGDPK  H+A+NDWYRL+RSLEIIKSSGSPPSAF+VPY+SFR+Q D+  A   +S D+
Sbjct: 20  VKAGDPKVQHIAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQGDYRVADGSDSSDM 79

Query: 113 TFSGNKHEEKLSKELDYDFKCFFLSSRRTDLYRLID 6
             + +  +E  S +LDYDF CFFLSS R DLY+ ID
Sbjct: 80  NTNYDAMKETNSAKLDYDFMCFFLSSDRLDLYKSID 115


>ref|XP_003543220.1| PREDICTED: tRNA dimethylallyltransferase 9-like [Glycine max]
          Length = 448

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/96 (63%), Positives = 74/96 (77%), Gaps = 2/96 (2%)
 Frame = -1

Query: 287 VKAGDPKAHHVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGAVNS--LDV 114
           VKAGDPKA  +A+NDWYRL+RSLEIIKSSGSPPSAF+VPY+SFR+Q ++  A  S   D+
Sbjct: 189 VKAGDPKAQFLAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQGEYGVADGSELSDM 248

Query: 113 TFSGNKHEEKLSKELDYDFKCFFLSSRRTDLYRLID 6
              G+  E+  S ELDY+F CFFLSS R DLY+ ID
Sbjct: 249 NTYGDAMEKTNSSELDYEFMCFFLSSHRLDLYKSID 284


>emb|CBI20214.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  115 bits (289), Expect = 3e-24
 Identities = 60/94 (63%), Positives = 71/94 (75%)
 Frame = -1

Query: 287 VKAGDPKAHHVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGAVNSLDVTF 108
           VKAGD KA  +A NDWYRL+RSLEIIKSSGSPPSAF VPY+SFR+Q       +S DV  
Sbjct: 177 VKAGDSKAQSLAANDWYRLRRSLEIIKSSGSPPSAFHVPYDSFREQP--SSVDHSHDVNS 234

Query: 107 SGNKHEEKLSKELDYDFKCFFLSSRRTDLYRLID 6
           S +  +E  SKELD++F CFFLSS+R +LYR ID
Sbjct: 235 SSDGSKENKSKELDFEFICFFLSSQRLELYRSID 268


>ref|XP_002283012.1| PREDICTED: tRNA dimethylallyltransferase 9 [Vitis vinifera]
          Length = 447

 Score =  115 bits (289), Expect = 3e-24
 Identities = 60/94 (63%), Positives = 71/94 (75%)
 Frame = -1

Query: 287 VKAGDPKAHHVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGAVNSLDVTF 108
           VKAGD KA  +A NDWYRL+RSLEIIKSSGSPPSAF VPY+SFR+Q       +S DV  
Sbjct: 192 VKAGDSKAQSLAANDWYRLRRSLEIIKSSGSPPSAFHVPYDSFREQP--SSVDHSHDVNS 249

Query: 107 SGNKHEEKLSKELDYDFKCFFLSSRRTDLYRLID 6
           S +  +E  SKELD++F CFFLSS+R +LYR ID
Sbjct: 250 SSDGSKENKSKELDFEFICFFLSSQRLELYRSID 283


>ref|XP_002300421.1| tRNA isopentenyltransferase [Populus trichocarpa]
           gi|222847679|gb|EEE85226.1| tRNA isopentenyltransferase
           [Populus trichocarpa]
          Length = 443

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/94 (62%), Positives = 69/94 (73%)
 Frame = -1

Query: 287 VKAGDPKAHHVALNDWYRLKRSLEIIKSSGSPPSAFQVPYESFRDQLDFEGAVNSLDVTF 108
           VKAGD +A  +A NDWYRL+RSLEIIK+SGSPPSAFQVPY+SF+DQ D     +SLDV  
Sbjct: 189 VKAGDSQAQFLAANDWYRLRRSLEIIKTSGSPPSAFQVPYKSFKDQFDTRLTDSSLDVNS 248

Query: 107 SGNKHEEKLSKELDYDFKCFFLSSRRTDLYRLID 6
           SG         +LDY+F CFFLSS R DLY+ ID
Sbjct: 249 SG---------DLDYEFICFFLSSPRLDLYKSID 273


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