BLASTX nr result

ID: Coptis24_contig00028081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028081
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613508.1| Resistance protein [Medicago truncatula] gi|...   124   8e-27
ref|XP_003613342.1| Nbs-lrr resistance protein [Medicago truncat...   122   2e-26
ref|XP_003613323.1| NBS-LRR disease resistance-like protein [Med...   120   4e-26
ref|XP_003613325.1| Resistance protein [Medicago truncatula] gi|...   114   3e-24
ref|XP_003613318.1| Disease resistance-like protein 17-12 [Medic...   112   3e-24

>ref|XP_003613508.1| Resistance protein [Medicago truncatula]
           gi|355514843|gb|AES96466.1| Resistance protein [Medicago
           truncatula]
          Length = 1125

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/153 (41%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
 Frame = +2

Query: 50  KLKDATYDADDVLDEWATKSMDLEYDMRSGGYSKQVCDSFLSCFKIDKYKFHWKIAKKIN 229
           KLKDA Y  DD++DE AT+++++EY     G S ++  SFLS F      F +K+AKK+ 
Sbjct: 68  KLKDAAYTLDDIMDECATEALEMEYKASKCGLSHKMQSSFLSSFHPKHIAFRYKLAKKMK 127

Query: 230 ELSERFDEIAAGRFKFHLRGVVGQRVEFYPN-HETSSILTEPKVYGRDEEKESVIRLLLN 406
            +    D+IAA + KFHL  +V +R    P+  +T+SI+T+P VYGR+E+K+ ++  L+ 
Sbjct: 128 RIGVWLDDIAAEKNKFHLTEIVRERSGVVPDWRQTTSIVTQPLVYGRNEDKDKIVDFLVG 187

Query: 407 NVNSEEDVSTCPXXXXXXXXKTTLAQLVYNEDR 505
           + + +ED+S  P        KTTLAQLV+N D+
Sbjct: 188 DASEQEDLSVYPIVGLGGLGKTTLAQLVFNHDK 220


>ref|XP_003613342.1| Nbs-lrr resistance protein [Medicago truncatula]
           gi|355514677|gb|AES96300.1| Nbs-lrr resistance protein
           [Medicago truncatula]
          Length = 1140

 Score =  122 bits (307), Expect = 2e-26
 Identities = 65/162 (40%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
 Frame = +2

Query: 23  GKRDQ*LVRKLKDATYDADDVLDEWATKSMDLEYDMRSGGYSKQVCDSFLSCFKIDKYKF 202
           GK  +  + KLKDA Y  DD+L+E ATK+++LEY    GG   ++  S L      +  F
Sbjct: 59  GKAIKDWLLKLKDAAYVLDDILEECATKALELEYKGSKGGLRHKLHSSCLCSLHPKQVAF 118

Query: 203 HWKIAKKINELSERFDEIAAGRFKFHLRGVVGQRVEFYPN-HETSSILTEPKVYGRDEEK 379
            +KIAKK+  + ER DEIAA R KFHL  +V ++    PN  +T+SI+++P+VYGRD++ 
Sbjct: 119 RYKIAKKMKNIRERLDEIAAERIKFHLTEIVREKRSGVPNWRQTTSIISQPQVYGRDKDM 178

Query: 380 ESVIRLLLNNVNSEEDVSTCPXXXXXXXXKTTLAQLVYNEDR 505
           + ++  L+   +  ED+   P        KTTLAQL++N +R
Sbjct: 179 DKIVDFLVGEASGLEDLCVYPIVGIGGLGKTTLAQLIFNHER 220


>ref|XP_003613323.1| NBS-LRR disease resistance-like protein [Medicago truncatula]
           gi|355514658|gb|AES96281.1| NBS-LRR disease
           resistance-like protein [Medicago truncatula]
          Length = 1228

 Score =  120 bits (302), Expect(2) = 4e-26
 Identities = 67/153 (43%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
 Frame = +2

Query: 50  KLKDATYDADDVLDEWATKSMDLEYDMRSGGYSKQVCDSFLSCFKIDKYKFHWKIAKKIN 229
           KLKDA +  DD+LDE ATK+++ EY     G S++V  S LS        F +KIAKKI 
Sbjct: 64  KLKDAAHVLDDILDECATKALEPEYKGFKYGPSQKVQSSCLSSLNPKNVAFRYKIAKKIK 123

Query: 230 ELSERFDEIAAGRFKFHLRGVVGQ-RVEFYPNHETSSILTEPKVYGRDEEKESVIRLLLN 406
            + ER D IA  R KFHL  +V + R E     +T+SI+T+P+VYGRDE+K  ++  L++
Sbjct: 124 RIRERLDGIAEERSKFHLTEIVRERRCEVLDWRQTTSIITQPQVYGRDEDKSKIVDFLVD 183

Query: 407 NVNSEEDVSTCPXXXXXXXXKTTLAQLVYNEDR 505
           + +S ED+S  P        KTTLAQ+V+N ++
Sbjct: 184 DASSFEDLSVYPIVGLGGLGKTTLAQIVFNHEK 216



 Score = 21.9 bits (45), Expect(2) = 4e-26
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 3  AEEKQLTENAINNW 44
          AEEKQ +  AI +W
Sbjct: 48 AEEKQFSNRAIKDW 61


>ref|XP_003613325.1| Resistance protein [Medicago truncatula]
           gi|355514660|gb|AES96283.1| Resistance protein [Medicago
           truncatula]
          Length = 499

 Score =  114 bits (284), Expect(2) = 3e-24
 Identities = 61/153 (39%), Positives = 95/153 (62%), Gaps = 1/153 (0%)
 Frame = +2

Query: 50  KLKDATYDADDVLDEWATKSMDLEYDMRSGGYSKQVCDSFLSCFKIDKYKFHWKIAKKIN 229
           KLKDA Y  DD+LDE AT+++++EY    G  S  V   F+S F      F +K+AKK+ 
Sbjct: 64  KLKDAAYVLDDILDECATQALEMEYKGSKGKPSHTVQSFFVSSFHPKHVAFRYKLAKKMK 123

Query: 230 ELSERFDEIAAGRFKFHLRGVVGQRVEFYPN-HETSSILTEPKVYGRDEEKESVIRLLLN 406
            + ER DEIA  R KFHL  +V +R     +  +T+S +T+P+V+GR+E+K+ ++  L++
Sbjct: 124 RIRERLDEIAEERSKFHLTEIVRERRSGVLDWRQTTSNITQPQVFGRNEDKDQIVDFLVD 183

Query: 407 NVNSEEDVSTCPXXXXXXXXKTTLAQLVYNEDR 505
           +  + ED+S  P        KTTLAQ+V+N ++
Sbjct: 184 DAYTCEDLSVYPVVGLGGLGKTTLAQVVFNHEK 216



 Score = 22.7 bits (47), Expect(2) = 3e-24
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 3  AEEKQLTENAINNW 44
          AEEKQ T  AI +W
Sbjct: 48 AEEKQFTYKAIKDW 61


>ref|XP_003613318.1| Disease resistance-like protein 17-12 [Medicago truncatula]
           gi|355514653|gb|AES96276.1| Disease resistance-like
           protein 17-12 [Medicago truncatula]
          Length = 472

 Score =  112 bits (280), Expect(2) = 3e-24
 Identities = 61/152 (40%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
 Frame = +2

Query: 50  KLKDATYDADDVLDEWATKSMDLEYDMRSGGYSKQVCDSFLSCFKIDKYKFHWKIAKKIN 229
           KLKDA +  DD+LDE AT+S+++EY     G S +V  SF+S F      F +KIAKK+ 
Sbjct: 64  KLKDAVHVLDDILDECATQSLEMEYK----GLSHKVQSSFVSSFHPKHVAFRYKIAKKMK 119

Query: 230 ELSERFDEIAAGRFKFHLRGVVGQRVEFYPN-HETSSILTEPKVYGRDEEKESVIRLLLN 406
            + ER +EIA  R KFHL  +V ++ +   +  +T+SI+++P+V+GRD +++ ++ +L+N
Sbjct: 120 SIRERLNEIAEERSKFHLIEMVKEKRDGVIDWRQTTSIISQPQVFGRDGDRDKMVDILVN 179

Query: 407 NVNSEEDVSTCPXXXXXXXXKTTLAQLVYNED 502
             +  ED+S  P        KTTLAQL++N +
Sbjct: 180 GASGFEDLSVYPIVGLGGLGKTTLAQLIFNHE 211



 Score = 24.3 bits (51), Expect(2) = 3e-24
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 3  AEEKQLTENAINNW 44
          AEEKQ T+ AI +W
Sbjct: 48 AEEKQFTDKAIKDW 61


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