BLASTX nr result

ID: Coptis24_contig00028075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028075
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67293.1| hypothetical protein VITISV_040599 [Vitis vinifera]   146   2e-33
ref|XP_002267334.2| PREDICTED: methylglutaconyl-CoA hydratase, m...   144   1e-32
emb|CBI25767.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_003570006.1| PREDICTED: methylglutaconyl-CoA hydratase, m...   138   6e-31
ref|NP_001047609.1| Os02g0654100 [Oryza sativa Japonica Group] g...   137   7e-31

>emb|CAN67293.1| hypothetical protein VITISV_040599 [Vitis vinifera]
          Length = 304

 Score =  146 bits (369), Expect = 2e-33
 Identities = 72/84 (85%), Positives = 78/84 (92%)
 Frame = -1

Query: 414 GLVNYCVPAGGAHLKALEIAQDINQKGPMAIRMAKRAIDEGLEVEFSSALALEEECYEQL 235
           GLVNYCVPAG AHLKALEIAQ INQKGP+A+RMAKRAI+EGLE++  SALALEEECYEQL
Sbjct: 221 GLVNYCVPAGEAHLKALEIAQHINQKGPLALRMAKRAINEGLELDMESALALEEECYEQL 280

Query: 234 LNTKDRLEGLAAFAEKRKPIYTGK 163
           LNTKDRLEGLAAFAEKRKP Y G+
Sbjct: 281 LNTKDRLEGLAAFAEKRKPRYNGE 304


>ref|XP_002267334.2| PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial [Vitis
           vinifera]
          Length = 295

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/84 (83%), Positives = 78/84 (92%)
 Frame = -1

Query: 414 GLVNYCVPAGGAHLKALEIAQDINQKGPMAIRMAKRAIDEGLEVEFSSALALEEECYEQL 235
           GLVNYCVPAG AHLKALEIAQ INQKGP+A++MAKRAI+EGLE++  SALALEEECYEQL
Sbjct: 212 GLVNYCVPAGEAHLKALEIAQHINQKGPLALQMAKRAINEGLELDMESALALEEECYEQL 271

Query: 234 LNTKDRLEGLAAFAEKRKPIYTGK 163
           LNTKDRLEGLAAF+EKRKP Y G+
Sbjct: 272 LNTKDRLEGLAAFSEKRKPRYNGE 295


>emb|CBI25767.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score =  144 bits (362), Expect = 1e-32
 Identities = 70/84 (83%), Positives = 78/84 (92%)
 Frame = -1

Query: 414 GLVNYCVPAGGAHLKALEIAQDINQKGPMAIRMAKRAIDEGLEVEFSSALALEEECYEQL 235
           GLVNYCVPAG AHLKALEIAQ INQKGP+A++MAKRAI+EGLE++  SALALEEECYEQL
Sbjct: 561 GLVNYCVPAGEAHLKALEIAQHINQKGPLALQMAKRAINEGLELDMESALALEEECYEQL 620

Query: 234 LNTKDRLEGLAAFAEKRKPIYTGK 163
           LNTKDRLEGLAAF+EKRKP Y G+
Sbjct: 621 LNTKDRLEGLAAFSEKRKPRYNGE 644


>ref|XP_003570006.1| PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial-like
           [Brachypodium distachyon]
          Length = 304

 Score =  138 bits (347), Expect = 6e-31
 Identities = 63/84 (75%), Positives = 80/84 (95%)
 Frame = -1

Query: 414 GLVNYCVPAGGAHLKALEIAQDINQKGPMAIRMAKRAIDEGLEVEFSSALALEEECYEQL 235
           G+VNYCVP G A+ KALE+A++INQKGP+A+RMAK+AI++G+EV+ SSALA+EEECYEQ+
Sbjct: 221 GVVNYCVPGGDAYQKALELAREINQKGPLALRMAKKAINQGMEVDLSSALAIEEECYEQV 280

Query: 234 LNTKDRLEGLAAFAEKRKPIYTGK 163
           L+T+DRLEGLAAFAEKRKP+YTGK
Sbjct: 281 LHTQDRLEGLAAFAEKRKPLYTGK 304


>ref|NP_001047609.1| Os02g0654100 [Oryza sativa Japonica Group]
           gi|49388193|dbj|BAD25316.1| putative enoyl-CoA hydratase
           [Oryza sativa Japonica Group]
           gi|113537140|dbj|BAF09523.1| Os02g0654100 [Oryza sativa
           Japonica Group] gi|215678807|dbj|BAG95244.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222623362|gb|EEE57494.1| hypothetical protein
           OsJ_07771 [Oryza sativa Japonica Group]
          Length = 300

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/84 (75%), Positives = 80/84 (95%)
 Frame = -1

Query: 414 GLVNYCVPAGGAHLKALEIAQDINQKGPMAIRMAKRAIDEGLEVEFSSALALEEECYEQL 235
           G+VNYCVPAG A+ +ALE+AQ+INQKGP+AIRMAK+AI++G+EV+ S+ LA+EEECYEQ+
Sbjct: 217 GVVNYCVPAGEAYKRALELAQEINQKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQV 276

Query: 234 LNTKDRLEGLAAFAEKRKPIYTGK 163
           L+T+DRLEGLAAFAEKRKP+YTGK
Sbjct: 277 LHTQDRLEGLAAFAEKRKPVYTGK 300


Top