BLASTX nr result

ID: Coptis24_contig00028068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028068
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_003609136.1| hypothetical protein MTR_4g112370 [Medicago ...   129   2e-28
gb|ACJ84318.1| unknown [Medicago truncatula] gi|388515575|gb|AFK...   128   6e-28
ref|XP_003549815.1| PREDICTED: uncharacterized protein LOC100797...   125   4e-27
ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262...   124   6e-27

>ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|222865007|gb|EEF02138.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  130 bits (328), Expect = 9e-29
 Identities = 73/130 (56%), Positives = 91/130 (70%)
 Frame = +3

Query: 9   EDEDQEGLTSHSSSSQKCQQDKRELKNSVPRXXXXXXXXXXXXXXXXLQTMAAARFRSVL 188
           E++D+E LT +SSS  +  ++ +EL+ ++P                 L  +A ++ RS L
Sbjct: 31  EEDDEEILTFNSSSHCEELENDQELRITMPAAGTTQSVPRKKT----LPILAFSKLRSAL 86

Query: 189 IAFNKRRSHNSSGLGSRVVGTLFGYRRGHVHFAFQEDSKANPAFMIELATPTSGLVREMA 368
             F+K RS   SGLG+RVVGTLFGYRRGHVHFAFQED+K NPA +IELATPTS LVREMA
Sbjct: 87  TVFSKSRSAYHSGLGTRVVGTLFGYRRGHVHFAFQEDAKQNPALLIELATPTSVLVREMA 146

Query: 369 SGLVRIALEC 398
           SGLVRIALEC
Sbjct: 147 SGLVRIALEC 156


>ref|XP_003609136.1| hypothetical protein MTR_4g112370 [Medicago truncatula]
           gi|355510191|gb|AES91333.1| hypothetical protein
           MTR_4g112370 [Medicago truncatula]
          Length = 322

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/83 (78%), Positives = 72/83 (86%)
 Frame = +3

Query: 150 LQTMAAARFRSVLIAFNKRRSHNSSGLGSRVVGTLFGYRRGHVHFAFQEDSKANPAFMIE 329
           LQT+A +R RSVL  F+K RS+  SGLGSRVVGTLFGYRRGHVHFAFQ+D  + PAF+IE
Sbjct: 63  LQTVAISRIRSVLTVFSKNRSNLPSGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIE 122

Query: 330 LATPTSGLVREMASGLVRIALEC 398
           LATP SGLVREMASGLVRIALEC
Sbjct: 123 LATPISGLVREMASGLVRIALEC 145


>gb|ACJ84318.1| unknown [Medicago truncatula] gi|388515575|gb|AFK45849.1| unknown
           [Medicago truncatula]
          Length = 255

 Score =  128 bits (321), Expect = 6e-28
 Identities = 64/83 (77%), Positives = 71/83 (85%)
 Frame = +3

Query: 150 LQTMAAARFRSVLIAFNKRRSHNSSGLGSRVVGTLFGYRRGHVHFAFQEDSKANPAFMIE 329
           LQT+A +R RSVL  F+K RS+  SGLGSRVVGTLFGYRRGHVHFAFQ+D  + PAF+IE
Sbjct: 63  LQTVAISRIRSVLTVFSKNRSNLPSGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIE 122

Query: 330 LATPTSGLVREMASGLVRIALEC 398
           LATP SGLVREMASGLVRI LEC
Sbjct: 123 LATPISGLVREMASGLVRIVLEC 145


>ref|XP_003549815.1| PREDICTED: uncharacterized protein LOC100797914 [Glycine max]
          Length = 282

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/83 (75%), Positives = 70/83 (84%)
 Frame = +3

Query: 150 LQTMAAARFRSVLIAFNKRRSHNSSGLGSRVVGTLFGYRRGHVHFAFQEDSKANPAFMIE 329
           LQ +A +R RSVL  F+K RS+   GLGSRVVGTLFGYRRGHVHFAFQ+D  + PAF+IE
Sbjct: 93  LQAVAISRLRSVLTVFSKNRSNLPFGLGSRVVGTLFGYRRGHVHFAFQKDPTSQPAFLIE 152

Query: 330 LATPTSGLVREMASGLVRIALEC 398
           LATP SGLVREMASGLVRIALEC
Sbjct: 153 LATPISGLVREMASGLVRIALEC 175


>ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262757 [Vitis vinifera]
           gi|297737883|emb|CBI27084.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  124 bits (312), Expect = 6e-27
 Identities = 71/132 (53%), Positives = 85/132 (64%)
 Frame = +3

Query: 3   DYEDEDQEGLTSHSSSSQKCQQDKRELKNSVPRXXXXXXXXXXXXXXXXLQTMAAARFRS 182
           D +D D+E LT  SSS     +DK +  + +                  L++  A     
Sbjct: 30  DDDDNDEEVLTFSSSSHACDDEDKEKEADFISTSLSLAAPRKKAALSSKLRSALA----- 84

Query: 183 VLIAFNKRRSHNSSGLGSRVVGTLFGYRRGHVHFAFQEDSKANPAFMIELATPTSGLVRE 362
            L  F KRRSH SSGLG+RV+GTLFGYRRGHVHFAFQED K++PAF++ELAT TS LVRE
Sbjct: 85  -LTLFGKRRSHLSSGLGTRVIGTLFGYRRGHVHFAFQEDPKSHPAFLMELATSTSVLVRE 143

Query: 363 MASGLVRIALEC 398
           MASGLVRIALEC
Sbjct: 144 MASGLVRIALEC 155


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