BLASTX nr result

ID: Coptis24_contig00028053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028053
         (746 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19378.3| unnamed protein product [Vitis vinifera]               50   3e-07

>emb|CBI19378.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 49.7 bits (117), Expect(2) = 3e-07
 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
 Frame = -2

Query: 640 HVRSLTNLAVTMSDRSMIGYPTEAVNIIPTNFSANSWRSNNVEDHRKEVIHVTSQSGLLE 461
           +VRSLT+ A  +S  + +G P   ++ +P +FS +S RS + ED    +    S S    
Sbjct: 29  YVRSLTDAAERVSRGNAMGCPGVHISTLPKSFSVSSSRSGDGEDVGS-LSRSGSASSSSN 87

Query: 460 NVPMGV--RDIQLQSMKLPRSYRVGMER-N**MQCLYFRG*FKSKTNFWYLKSKSYAV*R 290
            V M V  +  ++ S   PRS  VGM R +    C +    F  K +F Y +S+SYAV  
Sbjct: 88  RVDMNVFLQPPKMGSRAAPRSCSVGMGRIDEDRPCDFEEDSFNVKADFLYPRSRSYAVTN 147

Query: 289 RRI 281
           RR+
Sbjct: 148 RRV 150



 Score = 30.8 bits (68), Expect(2) = 3e-07
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -3

Query: 708 KQQSKFTRCVKAPVKILSRARDFMCEAL 625
           + Q++F R +  P+++LS+ARDF   +L
Sbjct: 6   QSQNRFMRIITIPIRVLSKARDFYVRSL 33


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