BLASTX nr result
ID: Coptis24_contig00028053
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00028053 (746 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19378.3| unnamed protein product [Vitis vinifera] 50 3e-07 >emb|CBI19378.3| unnamed protein product [Vitis vinifera] Length = 152 Score = 49.7 bits (117), Expect(2) = 3e-07 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 3/123 (2%) Frame = -2 Query: 640 HVRSLTNLAVTMSDRSMIGYPTEAVNIIPTNFSANSWRSNNVEDHRKEVIHVTSQSGLLE 461 +VRSLT+ A +S + +G P ++ +P +FS +S RS + ED + S S Sbjct: 29 YVRSLTDAAERVSRGNAMGCPGVHISTLPKSFSVSSSRSGDGEDVGS-LSRSGSASSSSN 87 Query: 460 NVPMGV--RDIQLQSMKLPRSYRVGMER-N**MQCLYFRG*FKSKTNFWYLKSKSYAV*R 290 V M V + ++ S PRS VGM R + C + F K +F Y +S+SYAV Sbjct: 88 RVDMNVFLQPPKMGSRAAPRSCSVGMGRIDEDRPCDFEEDSFNVKADFLYPRSRSYAVTN 147 Query: 289 RRI 281 RR+ Sbjct: 148 RRV 150 Score = 30.8 bits (68), Expect(2) = 3e-07 Identities = 11/28 (39%), Positives = 20/28 (71%) Frame = -3 Query: 708 KQQSKFTRCVKAPVKILSRARDFMCEAL 625 + Q++F R + P+++LS+ARDF +L Sbjct: 6 QSQNRFMRIITIPIRVLSKARDFYVRSL 33