BLASTX nr result

ID: Coptis24_contig00028027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028027
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF16648.1|AC011661_26 T23J18.5 [Arabidopsis thaliana]             120   1e-25
ref|NP_172606.3| aarF domain-containing kinase [Arabidopsis thal...   120   1e-25
ref|XP_002892642.1| ABC1 family protein [Arabidopsis lyrata subs...   120   1e-25
gb|AAD25544.1|AC005850_1 Unknown protein [Arabidopsis thaliana]       117   7e-25
ref|NP_176358.2| aarF domain-containing kinase [Arabidopsis thal...   117   7e-25

>gb|AAF16648.1|AC011661_26 T23J18.5 [Arabidopsis thaliana]
          Length = 428

 Score =  120 bits (301), Expect = 1e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 8/149 (5%)
 Frame = +2

Query: 5   KGLASPEPLYPLVHPDVLVETFEEGESLARYIQGDSNLEPSFKDRDTIVGDGTRVLLKMF 184
           K ++ P+P+YPLVHP VLVET+E GES+ARY+ G   +E     +  +   GT  LLKM 
Sbjct: 192 KDVSFPKPVYPLVHPAVLVETYEHGESVARYVDG---MEGHEWIKTRLAHIGTHALLKML 248

Query: 185 AGNKFLGADISPRNILFR--------VDKEWPRFIILDVGMTSIFPRSYFRTVVDVIQAV 340
             + F+ AD+ P NIL R           + P  + LDVGMT+   ++    ++D  +AV
Sbjct: 249 LVDNFIHADMHPGNILVRKKASRGGLFKTKKPHIVFLDVGMTAELAKNDRENLLDFFKAV 308

Query: 341 GKRDGRSAAEGTLKLSMKQECPCPHAFIE 427
            +RDGR+AAE TLKLS KQ CP P AFIE
Sbjct: 309 ARRDGRTAAERTLKLSRKQNCPNPEAFIE 337


>ref|NP_172606.3| aarF domain-containing kinase [Arabidopsis thaliana]
           gi|332190608|gb|AEE28729.1| aarF domain-containing
           kinase [Arabidopsis thaliana]
          Length = 624

 Score =  120 bits (301), Expect = 1e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 8/149 (5%)
 Frame = +2

Query: 5   KGLASPEPLYPLVHPDVLVETFEEGESLARYIQGDSNLEPSFKDRDTIVGDGTRVLLKMF 184
           K ++ P+P+YPLVHP VLVET+E GES+ARY+ G   +E     +  +   GT  LLKM 
Sbjct: 388 KDVSFPKPVYPLVHPAVLVETYEHGESVARYVDG---MEGHEWIKTRLAHIGTHALLKML 444

Query: 185 AGNKFLGADISPRNILFR--------VDKEWPRFIILDVGMTSIFPRSYFRTVVDVIQAV 340
             + F+ AD+ P NIL R           + P  + LDVGMT+   ++    ++D  +AV
Sbjct: 445 LVDNFIHADMHPGNILVRKKASRGGLFKTKKPHIVFLDVGMTAELAKNDRENLLDFFKAV 504

Query: 341 GKRDGRSAAEGTLKLSMKQECPCPHAFIE 427
            +RDGR+AAE TLKLS KQ CP P AFIE
Sbjct: 505 ARRDGRTAAERTLKLSRKQNCPNPEAFIE 533


>ref|XP_002892642.1| ABC1 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338484|gb|EFH68901.1| ABC1 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 624

 Score =  120 bits (301), Expect = 1e-25
 Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 8/149 (5%)
 Frame = +2

Query: 5   KGLASPEPLYPLVHPDVLVETFEEGESLARYIQGDSNLEPSFKDRDTIVGDGTRVLLKMF 184
           K ++ P+P+YPLVHP VLVET+E GES+ARY+ G   +E     +  +   GT  LLKM 
Sbjct: 388 KDVSFPKPVYPLVHPAVLVETYEHGESVARYVDG---MEGHEWIKTRLAHIGTHALLKML 444

Query: 185 AGNKFLGADISPRNILFR--------VDKEWPRFIILDVGMTSIFPRSYFRTVVDVIQAV 340
             + F+ AD+ P NIL R           + P  + LDVGMT+   ++    ++D  +AV
Sbjct: 445 LVDNFIHADMHPGNILVRKKASGGGLFKTKKPHIVFLDVGMTAELSKNDRENLLDFFKAV 504

Query: 341 GKRDGRSAAEGTLKLSMKQECPCPHAFIE 427
            +RDGR+AAE TLKLS KQ CP P AFIE
Sbjct: 505 ARRDGRTAAERTLKLSRKQNCPNPEAFIE 533


>gb|AAD25544.1|AC005850_1 Unknown protein [Arabidopsis thaliana]
          Length = 428

 Score =  117 bits (294), Expect = 7e-25
 Identities = 65/149 (43%), Positives = 90/149 (60%), Gaps = 8/149 (5%)
 Frame = +2

Query: 5   KGLASPEPLYPLVHPDVLVETFEEGESLARYIQGDSNLEPSFKDRDTIVGDGTRVLLKMF 184
           K ++ P+P+YPL+HP VLVET+E GES+ARY+ G    E   K +  +   GT  LLKM 
Sbjct: 192 KDVSFPKPIYPLIHPAVLVETYEHGESVARYVDGSEGQE---KLKAKVAHIGTNALLKML 248

Query: 185 AGNKFLGADISPRNILFRVDK--------EWPRFIILDVGMTSIFPRSYFRTVVDVIQAV 340
             + F+ AD+ P NIL R +           P  + LDVGMT+   ++    ++   +AV
Sbjct: 249 LVDNFIHADMHPGNILVRPNNTRRGLFRSRKPHIVFLDVGMTAELSKTDRDNLLGFFKAV 308

Query: 341 GKRDGRSAAEGTLKLSMKQECPCPHAFIE 427
            +RDGR+AAE TLKLS +Q CP P AFI+
Sbjct: 309 ARRDGRTAAERTLKLSKQQNCPDPQAFIK 337


>ref|NP_176358.2| aarF domain-containing kinase [Arabidopsis thaliana]
           gi|22655250|gb|AAM98215.1| unknown protein [Arabidopsis
           thaliana] gi|27311981|gb|AAO00956.1| unknown protein
           [Arabidopsis thaliana] gi|332195744|gb|AEE33865.1| aarF
           domain-containing kinase [Arabidopsis thaliana]
          Length = 621

 Score =  117 bits (294), Expect = 7e-25
 Identities = 65/149 (43%), Positives = 90/149 (60%), Gaps = 8/149 (5%)
 Frame = +2

Query: 5   KGLASPEPLYPLVHPDVLVETFEEGESLARYIQGDSNLEPSFKDRDTIVGDGTRVLLKMF 184
           K ++ P+P+YPL+HP VLVET+E GES+ARY+ G    E   K +  +   GT  LLKM 
Sbjct: 385 KDVSFPKPIYPLIHPAVLVETYEHGESVARYVDGSEGQE---KLKAKVAHIGTNALLKML 441

Query: 185 AGNKFLGADISPRNILFRVDK--------EWPRFIILDVGMTSIFPRSYFRTVVDVIQAV 340
             + F+ AD+ P NIL R +           P  + LDVGMT+   ++    ++   +AV
Sbjct: 442 LVDNFIHADMHPGNILVRPNNTRRGLFRSRKPHIVFLDVGMTAELSKTDRDNLLGFFKAV 501

Query: 341 GKRDGRSAAEGTLKLSMKQECPCPHAFIE 427
            +RDGR+AAE TLKLS +Q CP P AFI+
Sbjct: 502 ARRDGRTAAERTLKLSKQQNCPDPQAFIK 530


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