BLASTX nr result

ID: Coptis24_contig00028011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028011
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   431   e-118
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   423   e-116
ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arab...   419   e-115
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   416   e-114
ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana] ...   412   e-113

>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  431 bits (1109), Expect = e-118
 Identities = 200/275 (72%), Positives = 235/275 (85%)
 Frame = +2

Query: 5    NGALLYKQGDEHNPIPIDPAGANLPQGGSIDGTYWLDLPIDGNAKERVKKGDLSSSGAYL 184
            NGALLY+QG+E  P+ IDP G+NLPQGGS DG YWLDLP+D  AKE VKKGDL  S  Y+
Sbjct: 287  NGALLYQQGEESKPVNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKKGDLQDSMTYM 346

Query: 185  HLKTMLGATFTDIAIWVFYPFNGAARAKVEFINVSLGKIGEHVGDWEHVTLRISNLTGEL 364
            H+K MLGATFTDIAIW+FYPFNG ARAKVE IN+SLGKIGEHVGDWEHVTLR+SN  G+L
Sbjct: 347  HIKPMLGATFTDIAIWIFYPFNGPARAKVELINISLGKIGEHVGDWEHVTLRVSNFNGKL 406

Query: 365  WRVYFSEHSGGTWIDASELEFQGGNKVVTYSSLHGHASYSKPGMVLQGNTKLGIGIRNDT 544
              V+FSEHS GTW++ASELEFQ GNKVV+Y+SLHGHA Y KPG+VLQG+    +GIRNDT
Sbjct: 407  MNVFFSEHSSGTWVNASELEFQNGNKVVSYASLHGHAFYPKPGLVLQGSG--AMGIRNDT 464

Query: 545  AKSKNVLDTGVRYEVVSADYLGSGVITEPPWLNFAREWGPKIDYDLDTELRKIEKFLPGK 724
            AKSK V+DTG RY VV+A+YLGS V+ EPPWLN+ R+WGPKI YDL  E++++EK LPGK
Sbjct: 465  AKSKMVMDTGTRYIVVAAEYLGSAVV-EPPWLNYYRKWGPKISYDLAAEIKEVEKLLPGK 523

Query: 725  LKKAFKQIVQSLPSEVLGEEGPTGPKMKKNWSGDE 829
            LK AF+++V+SLP+E+LGEEGPTGPKMKKNW GDE
Sbjct: 524  LKSAFEKLVKSLPNEILGEEGPTGPKMKKNWDGDE 558


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
            gi|223537142|gb|EEF38775.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 551

 Score =  423 bits (1088), Expect = e-116
 Identities = 195/277 (70%), Positives = 232/277 (83%)
 Frame = +2

Query: 2    SNGALLYKQGDEHNPIPIDPAGANLPQGGSIDGTYWLDLPIDGNAKERVKKGDLSSSGAY 181
            +NGALLYKQG+E NP+ ++  G+NLPQGG+ DG YWLDLP+D  AK+RVKKGDL  +  Y
Sbjct: 278  NNGALLYKQGEESNPVKVETNGSNLPQGGANDGVYWLDLPVDEKAKDRVKKGDLQETEVY 337

Query: 182  LHLKTMLGATFTDIAIWVFYPFNGAARAKVEFINVSLGKIGEHVGDWEHVTLRISNLTGE 361
            LH+K M GATFTDI IWVF PFNG A+AK+EF+NV LGKIGEHVGDWEHVTLR+SN   E
Sbjct: 338  LHIKPMFGATFTDIVIWVFCPFNGPAKAKIEFLNVPLGKIGEHVGDWEHVTLRVSNFNSE 397

Query: 362  LWRVYFSEHSGGTWIDASELEFQGGNKVVTYSSLHGHASYSKPGMVLQGNTKLGIGIRND 541
            LW VYFSEHSGG+WI+AS+LEFQ GNK V YSSLHGHA YSKPG+VLQGN   GIGIRND
Sbjct: 398  LWSVYFSEHSGGSWINASQLEFQSGNKFVGYSSLHGHAMYSKPGLVLQGNN--GIGIRND 455

Query: 542  TAKSKNVLDTGVRYEVVSADYLGSGVITEPPWLNFAREWGPKIDYDLDTELRKIEKFLPG 721
            TAKS  +LDTG ++ VV+A+YLG  +I EPPW+NF R+WGPKI Y++  E++KIEK LPG
Sbjct: 456  TAKSGKILDTGAKFSVVAAEYLGMTII-EPPWINFFRKWGPKISYNIADEIKKIEKILPG 514

Query: 722  KLKKAFKQIVQSLPSEVLGEEGPTGPKMKKNWSGDEA 832
            KLK AF+++V  LPSEVLGEEGPTGPK+K NW+GDE+
Sbjct: 515  KLKSAFEKVVNGLPSEVLGEEGPTGPKVKGNWTGDES 551


>ref|XP_002880101.1| hypothetical protein ARALYDRAFT_483550 [Arabidopsis lyrata subsp.
            lyrata] gi|297325940|gb|EFH56360.1| hypothetical protein
            ARALYDRAFT_483550 [Arabidopsis lyrata subsp. lyrata]
          Length = 564

 Score =  419 bits (1076), Expect = e-115
 Identities = 190/280 (67%), Positives = 235/280 (83%), Gaps = 3/280 (1%)
 Frame = +2

Query: 2    SNGALLYKQGDEHNPIPIDPAGANLPQGGSIDGTYWLDLPIDGNAKERVKKGDLSSSGAY 181
            +NGALLYK+G+E  PIPI+  G+NLPQGGS DG+YWLDLPID N KERVKKGDL S+  Y
Sbjct: 288  NNGALLYKKGEESKPIPIESNGSNLPQGGSNDGSYWLDLPIDKNGKERVKKGDLQSTKVY 347

Query: 182  LHLKTMLGATFTDIAIWVFYPFNGAARAKVEFINVSLGKIGEHVGDWEHVTLRISNLTGE 361
            LH+K MLGATFTDI+IW+FYPFNG ARAKV+F+N+ LG+IGEH+GDWEH TLRISN TGE
Sbjct: 348  LHIKPMLGATFTDISIWIFYPFNGPARAKVKFVNLPLGRIGEHIGDWEHTTLRISNFTGE 407

Query: 362  LWRVYFSEHSGGTWIDASELEFQGG---NKVVTYSSLHGHASYSKPGMVLQGNTKLGIGI 532
            LWRV+ S+HSGG W+DA +LEFQGG   NK V Y+SLHGHA Y KPG+VLQG+   G+GI
Sbjct: 408  LWRVFLSQHSGGVWVDACDLEFQGGGGSNKFVAYASLHGHAMYPKPGLVLQGDD--GVGI 465

Query: 533  RNDTAKSKNVLDTGVRYEVVSADYLGSGVITEPPWLNFAREWGPKIDYDLDTELRKIEKF 712
            RNDTAK K V+DTG+ YEV++A+Y G GV+ EPPW+N+ R+WGPKIDY++D E++ +E+ 
Sbjct: 466  RNDTAKGKKVIDTGLGYEVIAAEYDGGGVV-EPPWVNYFRKWGPKIDYNVDDEVKSVERI 524

Query: 713  LPGKLKKAFKQIVQSLPSEVLGEEGPTGPKMKKNWSGDEA 832
            LPG LKKAF + V+ +P EV GE+GPTGPK+K NW+GDE+
Sbjct: 525  LPGLLKKAFVKFVKKIPDEVYGEDGPTGPKLKSNWAGDES 564


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  416 bits (1070), Expect = e-114
 Identities = 192/275 (69%), Positives = 229/275 (83%)
 Frame = +2

Query: 5    NGALLYKQGDEHNPIPIDPAGANLPQGGSIDGTYWLDLPIDGNAKERVKKGDLSSSGAYL 184
            NGALLY++G+E  P+PI+  G+NLPQGGS DG YWLDLP++  AK+RVKKGDL  S  YL
Sbjct: 315  NGALLYERGEESKPVPIESNGSNLPQGGSNDGAYWLDLPVEEGAKDRVKKGDLQDSRVYL 374

Query: 185  HLKTMLGATFTDIAIWVFYPFNGAARAKVEFINVSLGKIGEHVGDWEHVTLRISNLTGEL 364
            H+K M GA FTDI +WVFYPFNG ++AKVEFIN+ LGKIGEHVGDWEH+TLRISN  GEL
Sbjct: 375  HIKPMFGAAFTDIVVWVFYPFNGPSKAKVEFINIPLGKIGEHVGDWEHLTLRISNFNGEL 434

Query: 365  WRVYFSEHSGGTWIDASELEFQGGNKVVTYSSLHGHASYSKPGMVLQGNTKLGIGIRNDT 544
              +YFSEHSGGTW+++SELEFQ GNK VTYSSLHGHA Y+KPG+VLQG+    IGIRNDT
Sbjct: 435  LSIYFSEHSGGTWVNSSELEFQNGNKAVTYSSLHGHAMYAKPGLVLQGSG--SIGIRNDT 492

Query: 545  AKSKNVLDTGVRYEVVSADYLGSGVITEPPWLNFAREWGPKIDYDLDTELRKIEKFLPGK 724
            AKSK  +DTG    VV+A+YLG   ITEPPWLN+ R+WGPK+ YD+  E++K+EK LPGK
Sbjct: 493  AKSKKFIDTGTNSLVVAAEYLGM-AITEPPWLNYFRKWGPKLTYDIAEEIKKVEKLLPGK 551

Query: 725  LKKAFKQIVQSLPSEVLGEEGPTGPKMKKNWSGDE 829
            LK AF + V+SLPSEVLGEEGPTGPK+K+NW+GDE
Sbjct: 552  LKSAFDKFVRSLPSEVLGEEGPTGPKLKRNWTGDE 586


>ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana]
            gi|15293039|gb|AAK93630.1| unknown protein [Arabidopsis
            thaliana] gi|20197184|gb|AAC16076.2| expressed protein
            [Arabidopsis thaliana] gi|22136978|gb|AAM91718.1| unknown
            protein [Arabidopsis thaliana]
            gi|330255303|gb|AEC10397.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 553

 Score =  412 bits (1060), Expect = e-113
 Identities = 188/279 (67%), Positives = 232/279 (83%), Gaps = 2/279 (0%)
 Frame = +2

Query: 2    SNGALLYKQGDEHNPIPIDPAGANLPQGGSIDGTYWLDLPIDGNAKERVKKGDLSSSGAY 181
            +NGALLYK+G+E  PIPI+  G+NLPQGGS DG+YWLDLPID N KERVKKGDL S+  Y
Sbjct: 278  NNGALLYKKGEESKPIPIESNGSNLPQGGSNDGSYWLDLPIDKNGKERVKKGDLQSTKVY 337

Query: 182  LHLKTMLGATFTDIAIWVFYPFNGAARAKVEFINVSLGKIGEHVGDWEHVTLRISNLTGE 361
            LH+K MLGATFTDI+IW+FYPFNG A+AKV+F+N+ LG+IGEH+GDWEH TLRISN TGE
Sbjct: 338  LHIKPMLGATFTDISIWIFYPFNGPAKAKVKFVNLPLGRIGEHIGDWEHTTLRISNFTGE 397

Query: 362  LWRVYFSEHSGGTWIDASELEFQ--GGNKVVTYSSLHGHASYSKPGMVLQGNTKLGIGIR 535
            LWRV+ S+HSGG WIDA +LEFQ  G NK V Y+SLHGHA Y KPG+VLQG+   G+GIR
Sbjct: 398  LWRVFLSQHSGGIWIDACDLEFQDGGNNKFVAYASLHGHAMYPKPGLVLQGDD--GVGIR 455

Query: 536  NDTAKSKNVLDTGVRYEVVSADYLGSGVITEPPWLNFAREWGPKIDYDLDTELRKIEKFL 715
            NDT K K VLDTG+ YEV++A+Y G GV+ EPPW+ + R+WGPKIDY++D E++ +E+ L
Sbjct: 456  NDTGKGKKVLDTGLGYEVIAAEYDGGGVV-EPPWVKYFRKWGPKIDYNVDDEVKSVERIL 514

Query: 716  PGKLKKAFKQIVQSLPSEVLGEEGPTGPKMKKNWSGDEA 832
            PG LKKAF + V+ +P EV GE+GPTGPK+K NW+GDE+
Sbjct: 515  PGLLKKAFVKFVKKIPDEVYGEDGPTGPKLKSNWAGDES 553


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