BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00028003
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172771.1| PREDICTED: protein SCO1 homolog 1, mitochond...    69   4e-10
ref|XP_004148614.1| PREDICTED: protein SCO1 homolog 1, mitochond...    69   4e-10
ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochond...    62   4e-08
ref|XP_002882593.1| electron transport SCO1/SenC family protein ...    62   4e-08
ref|XP_002263427.1| PREDICTED: protein SCO1 homolog 1, mitochond...    62   6e-08

>ref|XP_004172771.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like, partial
           [Cucumis sativus]
          Length = 147

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
 Frame = -3

Query: 430 MASSLSRN-RLIQYIRRNFSTYTHQHNLIKPNPSSPSIHLLQST-SSPSVLCRNVVNQNS 257
           MA+ +SR+ + + Y   +FS +  + + I P+PS+ S  L  +    P+    +    N 
Sbjct: 1   MATIISRSAKHLHYANLSFSLHRMRLHSISPSPSTSSSVLAGANFHDPAFPLHSGPGMNF 60

Query: 256 MLTCSYRLLATSPSGTEKVEQNKPVXXXXXXXXXXXXXXXXXXXXXXXXXSLRGAPVTWL 77
           + T   RL +T+ +  +   Q+                             +RG PV+WL
Sbjct: 61  LATYMRRLYSTTSTTADS--QSAASEKSAESNSSEGDKSGNSNEGQDAGKPVRGGPVSWL 118

Query: 76  SFLFLIATGAGLVYYYDKEKKRHIE 2
           SFL L+ATGAGLV+YYD+EKKRHIE
Sbjct: 119 SFLLLVATGAGLVFYYDREKKRHIE 143


>ref|XP_004148614.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like [Cucumis
           sativus]
          Length = 324

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
 Frame = -3

Query: 430 MASSLSRN-RLIQYIRRNFSTYTHQHNLIKPNPSSPSIHLLQST-SSPSVLCRNVVNQNS 257
           MA+ +SR+ + + Y   +FS +  + + I P+PS+ S  L  +    P+    +    N 
Sbjct: 1   MATIISRSAKHLHYANLSFSLHRMRLHSISPSPSTSSSVLAGANFHDPAFPLHSGPGMNF 60

Query: 256 MLTCSYRLLATSPSGTEKVEQNKPVXXXXXXXXXXXXXXXXXXXXXXXXXSLRGAPVTWL 77
           + T   RL +T+ +  +   Q+                             +RG PV+WL
Sbjct: 61  LATYMRRLYSTTSTTADS--QSAASEKSAESNSSEGDKSGNSNEGQDAGKPVRGGPVSWL 118

Query: 76  SFLFLIATGAGLVYYYDKEKKRHIE 2
           SFL L+ATGAGLV+YYD+EKKRHIE
Sbjct: 119 SFLLLVATGAGLVFYYDREKKRHIE 143


>ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like [Glycine max]
          Length = 332

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/34 (76%), Positives = 31/34 (91%)
 Frame = -3

Query: 103 LRGAPVTWLSFLFLIATGAGLVYYYDKEKKRHIE 2
           +RG PV+WLSFL L+ TGAGLV+YYD+EKKRHIE
Sbjct: 118 VRGGPVSWLSFLLLVLTGAGLVFYYDREKKRHIE 151


>ref|XP_002882593.1| electron transport SCO1/SenC family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328433|gb|EFH58852.1| electron
           transport SCO1/SenC family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 334

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = -3

Query: 103 LRGAPVTWLSFLFLIATGAGLVYYYDKEKKRHIE 2
           +RG PV+W+SF  L ATGAGLVYYYD+EKKRHIE
Sbjct: 120 VRGGPVSWMSFFLLFATGAGLVYYYDREKKRHIE 153


>ref|XP_002263427.1| PREDICTED: protein SCO1 homolog 1, mitochondrial [Vitis vinifera]
           gi|296083175|emb|CBI22811.3| unnamed protein product
           [Vitis vinifera]
          Length = 302

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/34 (79%), Positives = 30/34 (88%)
 Frame = -3

Query: 103 LRGAPVTWLSFLFLIATGAGLVYYYDKEKKRHIE 2
           +RG PV+WLSFL LI TGAGLV+YYD EKKRHIE
Sbjct: 88  VRGGPVSWLSFLLLIFTGAGLVFYYDNEKKRHIE 121