BLASTX nr result
ID: Coptis24_contig00027999
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027999 (1169 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera] 583 e-164 ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containi... 582 e-164 ref|XP_002320305.1| predicted protein [Populus trichocarpa] gi|2... 557 e-156 ref|XP_002515292.1| pentatricopeptide repeat-containing protein,... 532 e-149 ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containi... 531 e-148 >emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera] Length = 927 Score = 583 bits (1504), Expect = e-164 Identities = 273/340 (80%), Positives = 313/340 (92%) Frame = +3 Query: 3 YNYKAGVDTFNSLLDALGRAKLGKEAQALFEKLKDRFPPDMRTYSVLLAGWCKVKNLMEA 182 YN+ AGVDT N LLD LGRAKLGKEAQALFEKL+DRF P++RTY+VLL GWC++KNL+EA Sbjct: 332 YNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEA 391 Query: 183 GRVWNEMIDKGLKPDIVAHHIMLEGLLRGRRESEAIKLFELMKAKGPSPSVRSYTILIRD 362 GR WNEMIDKG KPDI+AHH MLEGLL+ +++S+AIKLFE+MKAKGPSP+VR+YTILIRD Sbjct: 392 GRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRD 451 Query: 363 LCKRNKMEEAVKYFNEMVDIGCDLDPAIYTCLMVGFGNRKNLEKVYGLLKEMKEKGCPPD 542 LCK+ KM+EAV+YF+EMVD GC D A+YTCL+ GFGN+K ++KVY LLKEMKEKGCP D Sbjct: 452 LCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPAD 511 Query: 543 GLTYNALIKLMTNRQMPDDAVRIYKKMIQNGHKPTIHTYNMMMKSYFHLKNYEMGYAVWE 722 G TYNALIKLMTNRQMPDDAVRIYKKMIQNG +PT+HTYNMMMKSYF+ +NYEMG AVW+ Sbjct: 512 GRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRNYEMGCAVWK 571 Query: 723 EMASKGCCPDDNSYIVFVGGLIRHGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAG 902 EM KGCCPDDNSYIVF+GGLIRHGRSEEAC+YLEEMIEKGMKAPQLDYNKFAADFSRAG Sbjct: 572 EMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAG 631 Query: 903 KPNILEELAQKMKFSGKFEVSHVFARWSEMMKKSIKQREP 1022 KP+ILEELA+KMKF GKFEVS+VFARW+EMMKK +K+R+P Sbjct: 632 KPDILEELARKMKFEGKFEVSNVFARWAEMMKKRVKRRDP 671 >ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Vitis vinifera] Length = 679 Score = 582 bits (1501), Expect = e-164 Identities = 273/340 (80%), Positives = 312/340 (91%) Frame = +3 Query: 3 YNYKAGVDTFNSLLDALGRAKLGKEAQALFEKLKDRFPPDMRTYSVLLAGWCKVKNLMEA 182 YN+ AGVDT N LLD LGRAKLGKEAQALFEKL+DRF P++RTY+VLL GWC++KNL+EA Sbjct: 332 YNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEA 391 Query: 183 GRVWNEMIDKGLKPDIVAHHIMLEGLLRGRRESEAIKLFELMKAKGPSPSVRSYTILIRD 362 GR WNEMIDKG KPDI+AHH MLEGLL+ +++S+AIKLFE+MKAKGPSP+VR+YTILIRD Sbjct: 392 GRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRD 451 Query: 363 LCKRNKMEEAVKYFNEMVDIGCDLDPAIYTCLMVGFGNRKNLEKVYGLLKEMKEKGCPPD 542 LCK+ KM+EAV+YF+EMVD GC D A+YTCL+ GFGN+K ++KVY LLKEMKEKGCP D Sbjct: 452 LCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPAD 511 Query: 543 GLTYNALIKLMTNRQMPDDAVRIYKKMIQNGHKPTIHTYNMMMKSYFHLKNYEMGYAVWE 722 G TYNALIKLMTNRQMPDDAVRIYKKMIQNG + T+HTYNMMMKSYF+ +NYEMG AVWE Sbjct: 512 GRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAVWE 571 Query: 723 EMASKGCCPDDNSYIVFVGGLIRHGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAG 902 EM KGCCPDDNSYIVF+GGLIRHGRSEEAC+YLEEMIEKGMKAPQLDYNKFAADFSRAG Sbjct: 572 EMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNKFAADFSRAG 631 Query: 903 KPNILEELAQKMKFSGKFEVSHVFARWSEMMKKSIKQREP 1022 KP+ILEELA+KMKF GKFEVS+VFARW+EMMKK +K+R+P Sbjct: 632 KPDILEELARKMKFEGKFEVSNVFARWAEMMKKRVKRRDP 671 >ref|XP_002320305.1| predicted protein [Populus trichocarpa] gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa] Length = 540 Score = 557 bits (1435), Expect = e-156 Identities = 262/338 (77%), Positives = 304/338 (89%) Frame = +3 Query: 3 YNYKAGVDTFNSLLDALGRAKLGKEAQALFEKLKDRFPPDMRTYSVLLAGWCKVKNLMEA 182 + Y+ GV+T N+LLD+LGRAKLGKEAQALF KL+ RF P++RTY+VLL GWC+VKNLMEA Sbjct: 203 HKYRVGVETINALLDSLGRAKLGKEAQALFGKLEGRFTPNLRTYTVLLNGWCRVKNLMEA 262 Query: 183 GRVWNEMIDKGLKPDIVAHHIMLEGLLRGRRESEAIKLFELMKAKGPSPSVRSYTILIRD 362 GR+WNEM+D+G KPDIV H+IMLEGLLR ++ S+AIK FE+MKAKGPSP VRSYTILIRD Sbjct: 263 GRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRD 322 Query: 363 LCKRNKMEEAVKYFNEMVDIGCDLDPAIYTCLMVGFGNRKNLEKVYGLLKEMKEKGCPPD 542 LCK+ KM+EAV YF EMVD GC D A+YTCLM G+GN K ++ VY LLKEMKEKGCPPD Sbjct: 323 LCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPD 382 Query: 543 GLTYNALIKLMTNRQMPDDAVRIYKKMIQNGHKPTIHTYNMMMKSYFHLKNYEMGYAVWE 722 G TYNALIKLMT+++MPDDAVRIYKKMIQNG +P+IH+YNM+MKSYF ++NYEMG+AVW+ Sbjct: 383 GKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWD 442 Query: 723 EMASKGCCPDDNSYIVFVGGLIRHGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAG 902 EM+ KG CPDDNSY VF+GGLI GRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAG Sbjct: 443 EMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAG 502 Query: 903 KPNILEELAQKMKFSGKFEVSHVFARWSEMMKKSIKQR 1016 KP+ILEELAQKMKFSGKFEVS+VFARW+EMMKK +K+R Sbjct: 503 KPDILEELAQKMKFSGKFEVSNVFARWAEMMKKRVKRR 540 >ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 533 Score = 532 bits (1371), Expect = e-149 Identities = 253/339 (74%), Positives = 292/339 (86%) Frame = +3 Query: 3 YNYKAGVDTFNSLLDALGRAKLGKEAQALFEKLKDRFPPDMRTYSVLLAGWCKVKNLMEA 182 YNYK GV+T N LLD+LGRAKLGKEAQALFE LK RF P++RTY+VLL GWCKVKNLMEA Sbjct: 192 YNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRFTPNLRTYTVLLNGWCKVKNLMEA 251 Query: 183 GRVWNEMIDKGLKPDIVAHHIMLEGLLRGRRESEAIKLFELMKAKGPSPSVRSYTILIRD 362 G VWNEMIDKG KPDIVAH+IMLEGLLR ++ S+AIKLF +MKAKGPSP VRSYTILIR Sbjct: 252 GSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRY 311 Query: 363 LCKRNKMEEAVKYFNEMVDIGCDLDPAIYTCLMVGFGNRKNLEKVYGLLKEMKEKGCPPD 542 LC+++KMEEAV+YF EM+D GC D A+YTCL+ GFGNRK ++ VY LLKEMKE+GCPPD Sbjct: 312 LCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPD 371 Query: 543 GLTYNALIKLMTNRQMPDDAVRIYKKMIQNGHKPTIHTYNMMMKSYFHLKNYEMGYAVWE 722 GLTYNALIKLMT +MPDDA RIYKKM Q+G +PTIHTYNM+MKSYF +NYEMG AVW+ Sbjct: 372 GLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWD 431 Query: 723 EMASKGCCPDDNSYIVFVGGLIRHGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAG 902 EM+ KG CPDDNSY V +GGLI GRS EACKYLEEM+EKGMKAPQLDYNKF AD SR G Sbjct: 432 EMSRKGFCPDDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYNKFGADLSRGG 491 Query: 903 KPNILEELAQKMKFSGKFEVSHVFARWSEMMKKSIKQRE 1019 P+ILEELAQ++KFSGKF VS+V A W+ M++K +K+R+ Sbjct: 492 NPDILEELAQRLKFSGKFGVSNVLASWAGMIQKRVKRRD 530 Score = 101 bits (252), Expect = 3e-19 Identities = 72/291 (24%), Positives = 127/291 (43%), Gaps = 34/291 (11%) Frame = +3 Query: 102 KDRFPPDMRTYSVLLAGWCKVKNLMEAGRVWNEMIDKGL--------------------- 218 K F D RTY+ +++ K + + EM KG+ Sbjct: 122 KQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLTMDTFSIAMRAFAAAKERKK 181 Query: 219 -------------KPDIVAHHIMLEGLLRGRRESEAIKLFELMKAKGPSPSVRSYTILIR 359 K + + +L+ L R + EA LFE +K + +P++R+YT+L+ Sbjct: 182 AVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGRF-TPNLRTYTVLLN 240 Query: 360 DLCKRNKMEEAVKYFNEMVDIGCDLDPAIYTCLMVGFGNRKNLEKVYGLLKEMKEKGCPP 539 CK + EA +NEM+D G D + ++ G K L MK KG P Sbjct: 241 GWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSP 300 Query: 540 DGLTYNALIKLMTNRQMPDDAVRIYKKMIQNGHKPTIHTYNMMMKSYFHLKNYEMGYAVW 719 D +Y LI+ + + ++AV +++MI +G KP Y ++ + + K +M Y + Sbjct: 301 DVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLL 360 Query: 720 EEMASKGCCPDDNSYIVFVGGLIRHGRSEEACKYLEEMIEKGMKAPQLDYN 872 +EM +GC PD +Y + + R ++A + ++M + G++ YN Sbjct: 361 KEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYN 411 >ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis sativus] gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like [Cucumis sativus] Length = 621 Score = 531 bits (1368), Expect = e-148 Identities = 250/342 (73%), Positives = 293/342 (85%) Frame = +3 Query: 3 YNYKAGVDTFNSLLDALGRAKLGKEAQALFEKLKDRFPPDMRTYSVLLAGWCKVKNLMEA 182 Y YK GV+T N LLD+LGRAKLGKEA +FEKL RF P+++TY+VLL GWC+V+NLMEA Sbjct: 272 YKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYTVLLNGWCRVRNLMEA 331 Query: 183 GRVWNEMIDKGLKPDIVAHHIMLEGLLRGRRESEAIKLFELMKAKGPSPSVRSYTILIRD 362 G++WN+MID+ KPDIVAH+ MLEGLLR ++ S+AIKLFE+MKAKGPSP V+SYTIL+RD Sbjct: 332 GKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRD 391 Query: 363 LCKRNKMEEAVKYFNEMVDIGCDLDPAIYTCLMVGFGNRKNLEKVYGLLKEMKEKGCPPD 542 CK+ KM+EAV+YF EM GC D AIYTCL+ GFGN+K ++ VYGLLKEMK GCPPD Sbjct: 392 FCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPD 451 Query: 543 GLTYNALIKLMTNRQMPDDAVRIYKKMIQNGHKPTIHTYNMMMKSYFHLKNYEMGYAVWE 722 G TYNALIKLMTN++MPDDAVRIYKKMI+NG KPT HTY+MMMKSYF +NYEMG A W+ Sbjct: 452 GKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWD 511 Query: 723 EMASKGCCPDDNSYIVFVGGLIRHGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAG 902 EM KGCCPDDNSY VF+GGLI GR EA KYLEEMIEKGMKAPQLDYNKFAADFSRAG Sbjct: 512 EMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAG 571 Query: 903 KPNILEELAQKMKFSGKFEVSHVFARWSEMMKKSIKQREPSH 1028 +P+ILEELAQKMKFSGKFE S+V ARW+EMM+K +K+R P++ Sbjct: 572 RPDILEELAQKMKFSGKFEASNVIARWAEMMRKRVKRRNPTN 613