BLASTX nr result

ID: Coptis24_contig00027997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027997
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCD58743.1| unnamed protein product [Schistosoma mansoni]          55   8e-06

>emb|CCD58743.1| unnamed protein product [Schistosoma mansoni]
          Length = 98

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/46 (54%), Positives = 28/46 (60%)
 Frame = +1

Query: 19  GPVWSHWLNLVHFQDYPIRLVSCYALLSRCRLPWPLSSCRHGAIPF 156
           GPVW    + +HFQ + IR VSCY LLS  RLPWP S C     PF
Sbjct: 10  GPVWVQCSSAIHFQGWLIRQVSCYTLLSGFRLPWPPSCCLDQPAPF 55


Top