BLASTX nr result
ID: Coptis24_contig00027995
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027995 (504 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi... 75 6e-12 ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_003624877.1| Protein Mpv17 [Medicago truncatula] gi|35549... 65 8e-09 ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|2... 65 8e-09 ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max] 64 1e-08 >ref|XP_002278511.1| PREDICTED: protein sym-1 [Vitis vinifera] gi|297741716|emb|CBI32848.3| unnamed protein product [Vitis vinifera] Length = 293 Score = 75.1 bits (183), Expect = 6e-12 Identities = 62/166 (37%), Positives = 73/166 (43%), Gaps = 1/166 (0%) Frame = -1 Query: 498 MAPYSTATLICKSPTLFRSVPHSSPTPFSTLTRKTPAAIPITNKGFNTCSPSSCFHSHAP 319 MAP + TL SP LFR + S T +S+ P I T + ++TC C+ SH Sbjct: 1 MAP-NPITLTRMSPLLFRFLGFSRNTIYSSRIPTNPIRIS-TVRSYSTCH-FFCYPSH-- 55 Query: 318 SLNYSSHGLSFNDSGRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 139 SS F D GRS+ Sbjct: 56 ----SSVRTVFKDLGRSEIGFSKKGSDYFRISAVSDGGSGGTGGFGGFGDGNSGGKSEGS 111 Query: 138 XXXK-WSLLSWYLAALETYPVFTKALTSAILTCVGDLICQLVIDRV 4 WSLLSWYLA LE YPV TKA+TSA LT VGDLICQLVID+V Sbjct: 112 GGGGDWSLLSWYLALLEKYPVLTKAITSAFLTLVGDLICQLVIDQV 157 >ref|XP_002323213.1| predicted protein [Populus trichocarpa] gi|222867843|gb|EEF04974.1| predicted protein [Populus trichocarpa] Length = 264 Score = 66.2 bits (160), Expect = 3e-09 Identities = 31/41 (75%), Positives = 34/41 (82%) Frame = -1 Query: 126 WSLLSWYLAALETYPVFTKALTSAILTCVGDLICQLVIDRV 4 WS LSWYL L YPV TKA+TSAILT +GDLICQLVID+V Sbjct: 88 WSFLSWYLNLLANYPVLTKAVTSAILTFMGDLICQLVIDQV 128 >ref|XP_003624877.1| Protein Mpv17 [Medicago truncatula] gi|355499892|gb|AES81095.1| Protein Mpv17 [Medicago truncatula] Length = 241 Score = 64.7 bits (156), Expect = 8e-09 Identities = 30/41 (73%), Positives = 33/41 (80%) Frame = -1 Query: 126 WSLLSWYLAALETYPVFTKALTSAILTCVGDLICQLVIDRV 4 WS LSWY+A L YPV KALTSAIL +GDLICQLVID+V Sbjct: 90 WSFLSWYMALLAKYPVPVKALTSAILNLIGDLICQLVIDKV 130 >ref|XP_002308859.1| predicted protein [Populus trichocarpa] gi|222854835|gb|EEE92382.1| predicted protein [Populus trichocarpa] Length = 286 Score = 64.7 bits (156), Expect = 8e-09 Identities = 30/40 (75%), Positives = 33/40 (82%) Frame = -1 Query: 126 WSLLSWYLAALETYPVFTKALTSAILTCVGDLICQLVIDR 7 WS LSWYL L YPV TKA+TSAILT +GDLICQLVID+ Sbjct: 110 WSFLSWYLNLLAKYPVLTKAVTSAILTLMGDLICQLVIDQ 149 >ref|XP_003554094.1| PREDICTED: protein sym-1-like [Glycine max] Length = 277 Score = 64.3 bits (155), Expect = 1e-08 Identities = 30/41 (73%), Positives = 33/41 (80%) Frame = -1 Query: 126 WSLLSWYLAALETYPVFTKALTSAILTCVGDLICQLVIDRV 4 WS LSWYLA L YPV KALTS+IL +GDLICQLVID+V Sbjct: 101 WSFLSWYLALLGKYPVAVKALTSSILNLIGDLICQLVIDQV 141