BLASTX nr result
ID: Coptis24_contig00027992
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027992 (416 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001130624.1| uncharacterized protein LOC100191723 [Zea ma... 49 2e-11 gb|ACY66875.1| P30Sh95F04 [Saccharum hybrid cultivar R570] 49 2e-11 gb|ACY66867.1| P10Sh148J07 [Saccharum hybrid cultivar R570] 49 2e-11 ref|NP_001146255.1| uncharacterized protein LOC100279829 [Zea ma... 49 2e-11 ref|NP_001170433.1| uncharacterized protein LOC100384425 [Zea ma... 55 9e-11 >ref|NP_001130624.1| uncharacterized protein LOC100191723 [Zea mays] gi|194689672|gb|ACF78920.1| unknown [Zea mays] Length = 601 Score = 49.3 bits (116), Expect(2) = 2e-11 Identities = 24/91 (26%), Positives = 47/91 (51%) Frame = -2 Query: 400 HNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFG 221 H+ A ++ +E ++ + KP +I + + + V+Y AW + + + + G Sbjct: 100 HHQQATVGWVARSVEARLR-DNPQIKPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNG 158 Query: 220 DYDGSYRMIPELRKQILLSNLGSIATYSGYG 128 + YR++P +QI+ +N GS+ATY G G Sbjct: 159 TLEDGYRLLPAYCEQIVKTNPGSVATYGGIG 189 Score = 43.9 bits (102), Expect(2) = 2e-11 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = -3 Query: 123 GNQFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7 GN F L ++F S GF+ GCRP++ +D LKGKY G Sbjct: 191 GNAFQRLFVSFHASIYGFLNGCRPLLEIDKADLKGKYLG 229 >gb|ACY66875.1| P30Sh95F04 [Saccharum hybrid cultivar R570] Length = 594 Score = 48.9 bits (115), Expect(2) = 2e-11 Identities = 24/91 (26%), Positives = 47/91 (51%) Frame = -2 Query: 400 HNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFG 221 H+ A ++ +E ++ + KP +I + + + V+Y AW + + + + G Sbjct: 100 HHQQATVGWVARSVEARLR-DNPQIKPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNG 158 Query: 220 DYDGSYRMIPELRKQILLSNLGSIATYSGYG 128 + YR++P +QI+ +N GS+ATY G G Sbjct: 159 TLEDGYRLLPAYCEQIVKTNPGSVATYRGIG 189 Score = 44.3 bits (103), Expect(2) = 2e-11 Identities = 20/44 (45%), Positives = 27/44 (61%) Frame = -3 Query: 138 RDMENGNQFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7 R + GN F L ++F S GF+ GCRP++ +D LKGKY G Sbjct: 186 RGIGPGNAFQRLFVSFRASIYGFLNGCRPLLEIDKADLKGKYLG 229 >gb|ACY66867.1| P10Sh148J07 [Saccharum hybrid cultivar R570] Length = 594 Score = 48.9 bits (115), Expect(2) = 2e-11 Identities = 24/91 (26%), Positives = 47/91 (51%) Frame = -2 Query: 400 HNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFG 221 H+ A ++ +E ++ + KP +I + + + V+Y AW + + + + G Sbjct: 100 HHQQATVGWVARSVEARLR-DNPQIKPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNG 158 Query: 220 DYDGSYRMIPELRKQILLSNLGSIATYSGYG 128 + YR++P +QI+ +N GS+ATY G G Sbjct: 159 TLEDGYRLLPAYCEQIVKTNPGSVATYRGIG 189 Score = 44.3 bits (103), Expect(2) = 2e-11 Identities = 20/44 (45%), Positives = 27/44 (61%) Frame = -3 Query: 138 RDMENGNQFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7 R + GN F L ++F S GF+ GCRP++ +D LKGKY G Sbjct: 186 RGIGPGNAFQRLFVSFRASIYGFLNGCRPLLEIDKADLKGKYLG 229 >ref|NP_001146255.1| uncharacterized protein LOC100279829 [Zea mays] gi|219886411|gb|ACL53580.1| unknown [Zea mays] Length = 594 Score = 48.9 bits (115), Expect(2) = 2e-11 Identities = 24/91 (26%), Positives = 47/91 (51%) Frame = -2 Query: 400 HNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFG 221 H+ A ++ +E ++ + KP +I + + + V+Y AW + + + + G Sbjct: 100 HHQQATVGWVARSVEARLR-DNPQIKPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNG 158 Query: 220 DYDGSYRMIPELRKQILLSNLGSIATYSGYG 128 + YR++P +QI+ +N GS+ATY G G Sbjct: 159 TLEDGYRLLPAYCEQIVKTNPGSVATYRGIG 189 Score = 44.3 bits (103), Expect(2) = 2e-11 Identities = 20/44 (45%), Positives = 27/44 (61%) Frame = -3 Query: 138 RDMENGNQFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7 R + GN F L ++F S GF+ GCRP++ +D LKGKY G Sbjct: 186 RGIGPGNAFQRLFVSFRASIYGFLNGCRPLLEIDKADLKGKYLG 229 >ref|NP_001170433.1| uncharacterized protein LOC100384425 [Zea mays] gi|224035813|gb|ACN36982.1| unknown [Zea mays] Length = 246 Score = 55.5 bits (132), Expect(2) = 9e-11 Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 2/96 (2%) Frame = -2 Query: 406 LEHNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKL 227 +E NCMA +++ + + D + +K +++K++ +H++++YW+ W R K LE+L Sbjct: 24 VEKNCMATNHWVKDRVLDWLAKDNKV-GAKELKKRLEEQYHLKLSYWVVWDGRKKALEQL 82 Query: 226 FGDYDGSYRMIPELRKQILLSNLGSIA--TYSGYGK 125 G +D S+ I + ++ +N GS+ Y GK Sbjct: 83 KGKWDDSFECIFSFKTEVEKTNPGSLVDIEYEKVGK 118 Score = 35.8 bits (81), Expect(2) = 9e-11 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = -3 Query: 117 QFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7 +F + +A + GF+ GCRP +G+D L GK+ G Sbjct: 121 RFIRMFVALKSCVDGFLNGCRPFLGVDSTHLTGKWKG 157