BLASTX nr result

ID: Coptis24_contig00027992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027992
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001130624.1| uncharacterized protein LOC100191723 [Zea ma...    49   2e-11
gb|ACY66875.1| P30Sh95F04 [Saccharum hybrid cultivar R570]             49   2e-11
gb|ACY66867.1| P10Sh148J07 [Saccharum hybrid cultivar R570]            49   2e-11
ref|NP_001146255.1| uncharacterized protein LOC100279829 [Zea ma...    49   2e-11
ref|NP_001170433.1| uncharacterized protein LOC100384425 [Zea ma...    55   9e-11

>ref|NP_001130624.1| uncharacterized protein LOC100191723 [Zea mays]
           gi|194689672|gb|ACF78920.1| unknown [Zea mays]
          Length = 601

 Score = 49.3 bits (116), Expect(2) = 2e-11
 Identities = 24/91 (26%), Positives = 47/91 (51%)
 Frame = -2

Query: 400 HNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFG 221
           H+  A   ++   +E ++   +   KP +I + +     + V+Y  AW  + + +  + G
Sbjct: 100 HHQQATVGWVARSVEARLR-DNPQIKPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNG 158

Query: 220 DYDGSYRMIPELRKQILLSNLGSIATYSGYG 128
             +  YR++P   +QI+ +N GS+ATY G G
Sbjct: 159 TLEDGYRLLPAYCEQIVKTNPGSVATYGGIG 189



 Score = 43.9 bits (102), Expect(2) = 2e-11
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = -3

Query: 123 GNQFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7
           GN F  L ++F  S  GF+ GCRP++ +D   LKGKY G
Sbjct: 191 GNAFQRLFVSFHASIYGFLNGCRPLLEIDKADLKGKYLG 229


>gb|ACY66875.1| P30Sh95F04 [Saccharum hybrid cultivar R570]
          Length = 594

 Score = 48.9 bits (115), Expect(2) = 2e-11
 Identities = 24/91 (26%), Positives = 47/91 (51%)
 Frame = -2

Query: 400 HNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFG 221
           H+  A   ++   +E ++   +   KP +I + +     + V+Y  AW  + + +  + G
Sbjct: 100 HHQQATVGWVARSVEARLR-DNPQIKPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNG 158

Query: 220 DYDGSYRMIPELRKQILLSNLGSIATYSGYG 128
             +  YR++P   +QI+ +N GS+ATY G G
Sbjct: 159 TLEDGYRLLPAYCEQIVKTNPGSVATYRGIG 189



 Score = 44.3 bits (103), Expect(2) = 2e-11
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = -3

Query: 138 RDMENGNQFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7
           R +  GN F  L ++F  S  GF+ GCRP++ +D   LKGKY G
Sbjct: 186 RGIGPGNAFQRLFVSFRASIYGFLNGCRPLLEIDKADLKGKYLG 229


>gb|ACY66867.1| P10Sh148J07 [Saccharum hybrid cultivar R570]
          Length = 594

 Score = 48.9 bits (115), Expect(2) = 2e-11
 Identities = 24/91 (26%), Positives = 47/91 (51%)
 Frame = -2

Query: 400 HNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFG 221
           H+  A   ++   +E ++   +   KP +I + +     + V+Y  AW  + + +  + G
Sbjct: 100 HHQQATVGWVARSVEARLR-DNPQIKPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNG 158

Query: 220 DYDGSYRMIPELRKQILLSNLGSIATYSGYG 128
             +  YR++P   +QI+ +N GS+ATY G G
Sbjct: 159 TLEDGYRLLPAYCEQIVKTNPGSVATYRGIG 189



 Score = 44.3 bits (103), Expect(2) = 2e-11
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = -3

Query: 138 RDMENGNQFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7
           R +  GN F  L ++F  S  GF+ GCRP++ +D   LKGKY G
Sbjct: 186 RGIGPGNAFQRLFVSFRASIYGFLNGCRPLLEIDKADLKGKYLG 229


>ref|NP_001146255.1| uncharacterized protein LOC100279829 [Zea mays]
           gi|219886411|gb|ACL53580.1| unknown [Zea mays]
          Length = 594

 Score = 48.9 bits (115), Expect(2) = 2e-11
 Identities = 24/91 (26%), Positives = 47/91 (51%)
 Frame = -2

Query: 400 HNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKLFG 221
           H+  A   ++   +E ++   +   KP +I + +     + V+Y  AW  + + +  + G
Sbjct: 100 HHQQATVGWVARSVEARLR-DNPQIKPKEILQDIREQHGVAVSYMQAWRGKERSMAAVNG 158

Query: 220 DYDGSYRMIPELRKQILLSNLGSIATYSGYG 128
             +  YR++P   +QI+ +N GS+ATY G G
Sbjct: 159 TLEDGYRLLPAYCEQIVKTNPGSVATYRGIG 189



 Score = 44.3 bits (103), Expect(2) = 2e-11
 Identities = 20/44 (45%), Positives = 27/44 (61%)
 Frame = -3

Query: 138 RDMENGNQFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7
           R +  GN F  L ++F  S  GF+ GCRP++ +D   LKGKY G
Sbjct: 186 RGIGPGNAFQRLFVSFRASIYGFLNGCRPLLEIDKADLKGKYLG 229


>ref|NP_001170433.1| uncharacterized protein LOC100384425 [Zea mays]
           gi|224035813|gb|ACN36982.1| unknown [Zea mays]
          Length = 246

 Score = 55.5 bits (132), Expect(2) = 9e-11
 Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = -2

Query: 406 LEHNCMADANFIVEELEDQITLHHKTFKPSDIQKQMFYNFHIEVNYWLAWHARAKVLEKL 227
           +E NCMA  +++ + + D +   +K     +++K++   +H++++YW+ W  R K LE+L
Sbjct: 24  VEKNCMATNHWVKDRVLDWLAKDNKV-GAKELKKRLEEQYHLKLSYWVVWDGRKKALEQL 82

Query: 226 FGDYDGSYRMIPELRKQILLSNLGSIA--TYSGYGK 125
            G +D S+  I   + ++  +N GS+    Y   GK
Sbjct: 83  KGKWDDSFECIFSFKTEVEKTNPGSLVDIEYEKVGK 118



 Score = 35.8 bits (81), Expect(2) = 9e-11
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = -3

Query: 117 QFTGLCIAFEGSFTGFVTGCRPIVGLDDCFLKGKYGG 7
           +F  + +A +    GF+ GCRP +G+D   L GK+ G
Sbjct: 121 RFIRMFVALKSCVDGFLNGCRPFLGVDSTHLTGKWKG 157


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