BLASTX nr result

ID: Coptis24_contig00027991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027991
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283685.1| PREDICTED: uncharacterized protein LOC100254...   120   1e-25
ref|XP_004137866.1| PREDICTED: uncharacterized protein LOC101207...   112   4e-23
ref|XP_004170537.1| PREDICTED: uncharacterized LOC101207081 [Cuc...   111   5e-23
ref|XP_002318984.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_003553580.1| PREDICTED: uncharacterized protein LOC100808...    99   4e-19

>ref|XP_002283685.1| PREDICTED: uncharacterized protein LOC100254632 [Vitis vinifera]
          Length = 152

 Score =  120 bits (300), Expect = 1e-25
 Identities = 58/92 (63%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
 Frame = +3

Query: 15  DDKERNNKNKHNLDSVKYIKKELVAKGKQRLERHPSDGSSLTR-LPKSGHGGKYTWEGPG 191
           D++ R    K  +D++KYI+K+L  KG  R+ERHP+DG SL R  PKSGHGGKYTWEGP 
Sbjct: 21  DEEGRKRVEKVEVDTLKYIEKKLENKGVLRMERHPADGLSLKRGPPKSGHGGKYTWEGPK 80

Query: 192 DAAENELEAAPPVTDEKDPNYVNEEVEERIVK 287
           D+  NELE APP  DEKDPN+V+EE EERIVK
Sbjct: 81  DSVHNELEGAPPALDEKDPNFVDEEEEERIVK 112


>ref|XP_004137866.1| PREDICTED: uncharacterized protein LOC101207081 [Cucumis sativus]
          Length = 144

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/88 (60%), Positives = 64/88 (72%), Gaps = 2/88 (2%)
 Frame = +3

Query: 24  ERNNKNKHNLDSVKYIKKELVAKGKQRLERHPSDGSSLTRLP--KSGHGGKYTWEGPGDA 197
           E+     HN+D++KYI+K+L+ KG QRLERHP  G +    P  KSG GGK+TWEGPGDA
Sbjct: 27  EKAEIESHNIDTIKYIEKKLIDKGIQRLERHPVHGHTGIGQPPPKSGRGGKFTWEGPGDA 86

Query: 198 AENELEAAPPVTDEKDPNYVNEEVEERI 281
            ENEL  APP  DEKDPNYV+EE EE +
Sbjct: 87  IENELSPAPPAIDEKDPNYVDEEEEEEV 114


>ref|XP_004170537.1| PREDICTED: uncharacterized LOC101207081 [Cucumis sativus]
          Length = 145

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/89 (60%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +3

Query: 24  ERNNKNKHNLDSVKYIKKELVAKGKQRLERHPSDGSSLTRLP--KSGHGGKYTWEGPGDA 197
           E+     HN+D++KYI+K+L+ KG QRLERHP  G +    P  KSG GGK+TWEGPGDA
Sbjct: 27  EKAEIESHNIDTIKYIEKKLIDKGVQRLERHPVHGHTGIGQPPPKSGRGGKFTWEGPGDA 86

Query: 198 AENELEAAPPVTDEKDPNYVNEEVEERIV 284
            ENEL  APP  DEKDPNYV+EE EE  V
Sbjct: 87  IENELSPAPPAIDEKDPNYVDEEEEEEEV 115


>ref|XP_002318984.1| predicted protein [Populus trichocarpa] gi|222857360|gb|EEE94907.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/91 (60%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
 Frame = +3

Query: 24  ERNNKNKHNLDSVKYIKKELVAKGKQRLERHPSDGSSLTRLP--KSGHGGKYTWEGPGDA 197
           E+     HN+D++KY++K+L+ KG  R+ERHP DG      P  KSGHGGK+TWEGP D 
Sbjct: 27  EKAELKTHNIDTIKYVEKKLMDKGVMRMERHPVDGKGGIGRPPPKSGHGGKFTWEGPYDE 86

Query: 198 AENELE-AAPPVTDEKDPNYVNEEVEERIVK 287
           AE ELE AAPP  DEKDPNYV+E VEE+IVK
Sbjct: 87  AEIELEAAAPPAIDEKDPNYVDEVVEEKIVK 117


>ref|XP_003553580.1| PREDICTED: uncharacterized protein LOC100808941 [Glycine max]
          Length = 146

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/93 (49%), Positives = 64/93 (68%), Gaps = 6/93 (6%)
 Frame = +3

Query: 24  ERNNKNKHNLDSVKYIKKELVAKGKQRLERHPSDGSSLTRLP-KSGHGGKYTWEGPGDAA 200
           E+   + HN+D+++Y++K+L+ KG QR +RHP+DG  ++R P KSGHGGK+TWEGP    
Sbjct: 27  EKTELSTHNIDTIRYVEKKLINKGVQRQDRHPADGIGISRPPPKSGHGGKFTWEGPATVE 86

Query: 201 ENELEAAPPVTDEKDPNYVN-----EEVEERIV 284
            +EL AAP   DE DPNYV+     EE  E +V
Sbjct: 87  NSELMAAPAAMDEGDPNYVDWEENGEEASELVV 119


Top