BLASTX nr result
ID: Coptis24_contig00027980
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027980 (549 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519815.1| conserved hypothetical protein [Ricinus comm... 86 5e-15 ref|XP_002329513.1| predicted protein [Populus trichocarpa] gi|2... 78 1e-12 ref|XP_002280310.1| PREDICTED: uncharacterized protein LOC100245... 76 4e-12 ref|XP_002326723.1| predicted protein [Populus trichocarpa] gi|2... 67 1e-09 ref|NP_568668.1| uncharacterized protein [Arabidopsis thaliana] ... 65 9e-09 >ref|XP_002519815.1| conserved hypothetical protein [Ricinus communis] gi|223540861|gb|EEF42419.1| conserved hypothetical protein [Ricinus communis] Length = 114 Score = 85.5 bits (210), Expect = 5e-15 Identities = 49/121 (40%), Positives = 71/121 (58%), Gaps = 6/121 (4%) Frame = +3 Query: 99 MSLSCLICQTSRKKEFDLEVRRDQHARSVAKLKSSCCIGLERNWSGGLSTPPRYKKIRNE 278 MSL+CL C+ ++ E ++ H R + CCI +ER+WSG L TPP Y+++ Sbjct: 1 MSLNCLTCRDLQRNNSGTEYDQEGHDRRI------CCIKVERSWSGNL-TPPPYEQVGKG 53 Query: 279 TSMLINKNVNVKKTHRRMVSL-----ERDCAPRLVRSGGMRRDWSFEDLRHRRN-GKKNC 440 S + + + KK HRR+ S+ + P+L+RS GMRRDWSFEDLR R + +K C Sbjct: 54 NSAVAARKI--KKDHRRLKSMGAIAFKGTDEPKLIRSSGMRRDWSFEDLRQRGDQDRKEC 111 Query: 441 R 443 R Sbjct: 112 R 112 >ref|XP_002329513.1| predicted protein [Populus trichocarpa] gi|222870222|gb|EEF07353.1| predicted protein [Populus trichocarpa] Length = 111 Score = 77.8 bits (190), Expect = 1e-12 Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 5/115 (4%) Frame = +3 Query: 99 MSLSCLICQTSRKKEFDLEVRRDQHARSVAKLKSSCCIGLERNWSGGLSTPPRYKKIRNE 278 MSL+CL CQ ++ + + E + + ++ CCI +ER+WSG LS PP Y ++ Sbjct: 1 MSLNCLTCQDLQRSDSERENLQGKRHKN----NKLCCIKVERSWSGKLS-PPSYGQVGRN 55 Query: 279 TSMLINKNVNVKKTHRRM-----VSLERDCAPRLVRSGGMRRDWSFEDLRHRRNG 428 +++ + V +KK RR+ V+ + P+LVRS GMRRDWSFEDLR NG Sbjct: 56 SNLFSARRV-IKKEPRRLNITGGVTFKGCDEPKLVRSSGMRRDWSFEDLRKACNG 109 >ref|XP_002280310.1| PREDICTED: uncharacterized protein LOC100245481 [Vitis vinifera] gi|147856529|emb|CAN80327.1| hypothetical protein VITISV_002985 [Vitis vinifera] Length = 106 Score = 75.9 bits (185), Expect = 4e-12 Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 1/113 (0%) Frame = +3 Query: 99 MSLSCLICQTSRKKEFDLEVRRDQHARSVAKLKSSCCIGLERNWSGGLSTPPR-YKKIRN 275 M+L+CL C + ++ D + ++ RS +L C G+ER+WSG L+ PP Y +R+ Sbjct: 1 MTLNCLNCGPALQRT-DSDTQKRYEDRSRLRL----CRGVERSWSGNLAPPPPPYGSMRH 55 Query: 276 ETSMLINKNVNVKKTHRRMVSLERDCAPRLVRSGGMRRDWSFEDLRHRRNGKK 434 ++ K HRR+ S+ + P+L+RSGGMRRDWSFEDLR RR+ K+ Sbjct: 56 GSAKKAGKG------HRRLNSVGEE--PKLIRSGGMRRDWSFEDLRQRRDEKR 100 >ref|XP_002326723.1| predicted protein [Populus trichocarpa] gi|222834045|gb|EEE72522.1| predicted protein [Populus trichocarpa] Length = 110 Score = 67.4 bits (163), Expect = 1e-09 Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 5/110 (4%) Frame = +3 Query: 99 MSLSCLICQTSRKKEFDLEVRRDQ-HARSVAKLKSSCCIGLERNWSGGLSTPPRYKKIRN 275 MSL+CL C+ ++ + + E + + H + CI +ER+WSG LS PP + ++ Sbjct: 1 MSLNCLSCRDLQRSDSERECLQGKPHQNKLG------CIMMERSWSGNLS-PPSHGQMGK 53 Query: 276 ETSMLINKNVNVKKTHRRM----VSLERDCAPRLVRSGGMRRDWSFEDLR 413 +++ + + V K+ HR V+ + PRLVRS GMRRDWSFEDLR Sbjct: 54 KSTAVAARKVIKKEPHRLNSAGGVTFKGCEEPRLVRSSGMRRDWSFEDLR 103 >ref|NP_568668.1| uncharacterized protein [Arabidopsis thaliana] gi|9758513|dbj|BAB08921.1| unnamed protein product [Arabidopsis thaliana] gi|15450357|gb|AAK96472.1| AT5g46770/MZA15_19 [Arabidopsis thaliana] gi|16974473|gb|AAL31240.1| AT5g46770/MZA15_19 [Arabidopsis thaliana] gi|332008040|gb|AED95423.1| uncharacterized protein [Arabidopsis thaliana] Length = 133 Score = 64.7 bits (156), Expect = 9e-09 Identities = 48/121 (39%), Positives = 59/121 (48%), Gaps = 16/121 (13%) Frame = +3 Query: 99 MSLSCLICQ----TSRKKEFDLEVRRDQHARSVAKLKSSCCIGL--ERNWSGGLSTPPRY 260 MSL+CL CQ T K+ DL L +CC+ RNWSG LS P Y Sbjct: 1 MSLNCLSCQALPRTDSNKDVDLSGPGPPRVEINNVLGKTCCVNPIGGRNWSGNLS-PRIY 59 Query: 261 KKIRNETSMLINKNVNVKKTHRRMVS----------LERDCAPRLVRSGGMRRDWSFEDL 410 +KI S L +K VKK H +S R P+LVRS G+RR+WSFE+L Sbjct: 60 EKIGRPGSSLAHKMKKVKKIHHVRLSGPVGSSPSNVPTRPEQPKLVRSTGVRRNWSFENL 119 Query: 411 R 413 R Sbjct: 120 R 120