BLASTX nr result

ID: Coptis24_contig00027979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027979
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277384.2| PREDICTED: uncharacterized protein LOC100262...   103   1e-20
emb|CAN83741.1| hypothetical protein VITISV_031206 [Vitis vinifera]   103   1e-20
ref|XP_003616693.1| CCP [Medicago truncatula] gi|355518028|gb|AE...    97   1e-18
ref|XP_002520791.1| conserved hypothetical protein [Ricinus comm...    96   3e-18
gb|AAO42282.1| unknown protein [Arabidopsis thaliana]                  92   6e-17

>ref|XP_002277384.2| PREDICTED: uncharacterized protein LOC100262072 [Vitis vinifera]
           gi|297736550|emb|CBI25421.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/57 (80%), Positives = 49/57 (85%)
 Frame = +1

Query: 70  VEKDIHKVPFAIGKIEGEECDVFSGKWVRDASTRPLYEESECPYIQPQLTCQEHGRP 240
           +EK   K+PFAIG+IEG  CDVFSG WVRD S RPLYEESECPYIQPQLTCQEHGRP
Sbjct: 56  IEKRREKLPFAIGEIEGGRCDVFSGMWVRDESNRPLYEESECPYIQPQLTCQEHGRP 112


>emb|CAN83741.1| hypothetical protein VITISV_031206 [Vitis vinifera]
          Length = 409

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/57 (80%), Positives = 49/57 (85%)
 Frame = +1

Query: 70  VEKDIHKVPFAIGKIEGEECDVFSGKWVRDASTRPLYEESECPYIQPQLTCQEHGRP 240
           +EK   K+PFAIG+IEG  CDVFSG WVRD S RPLYEESECPYIQPQLTCQEHGRP
Sbjct: 56  IEKRREKLPFAIGEIEGGRCDVFSGMWVRDESNRPLYEESECPYIQPQLTCQEHGRP 112


>ref|XP_003616693.1| CCP [Medicago truncatula] gi|355518028|gb|AES99651.1| CCP [Medicago
           truncatula]
          Length = 488

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/74 (67%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
 Frame = +1

Query: 22  QVALFSEMDCMF-LEVRVEKDIHKVPFAIGKIEGEECDVFSGKWVRDASTRPLYEESECP 198
           Q+  +S  D  F    RV+K I KVPFA+GK E E CD+FSG+WV D  TRPLYEESECP
Sbjct: 110 QLYNYSNQDKFFSTPERVKKQI-KVPFAVGKTE-EGCDIFSGRWVWDEDTRPLYEESECP 167

Query: 199 YIQPQLTCQEHGRP 240
           YIQPQLTCQEHGRP
Sbjct: 168 YIQPQLTCQEHGRP 181


>ref|XP_002520791.1| conserved hypothetical protein [Ricinus communis]
           gi|223539922|gb|EEF41500.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 421

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/61 (73%), Positives = 49/61 (80%)
 Frame = +1

Query: 58  LEVRVEKDIHKVPFAIGKIEGEECDVFSGKWVRDASTRPLYEESECPYIQPQLTCQEHGR 237
           L  R EK   K+PFAIGK   E CD+FSG+WV+D STRPLYEE ECPYIQPQLTCQEHGR
Sbjct: 55  LLTRTEKKWEKLPFAIGKTP-EGCDLFSGRWVKDESTRPLYEEWECPYIQPQLTCQEHGR 113

Query: 238 P 240
           P
Sbjct: 114 P 114


>gb|AAO42282.1| unknown protein [Arabidopsis thaliana]
          Length = 425

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 43/55 (78%), Positives = 45/55 (81%)
 Frame = +1

Query: 76  KDIHKVPFAIGKIEGEECDVFSGKWVRDASTRPLYEESECPYIQPQLTCQEHGRP 240
           K   K+ FAIGK E E CDVFSGKWVRD  +RPLYEE ECPYIQPQLTCQEHGRP
Sbjct: 65  KKSEKLAFAIGKTE-ESCDVFSGKWVRDEVSRPLYEEWECPYIQPQLTCQEHGRP 118


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