BLASTX nr result
ID: Coptis24_contig00027977
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027977 (767 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2... 69 1e-19 emb|CBI40164.3| unnamed protein product [Vitis vinifera] 67 2e-19 ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ... 61 9e-19 ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin... 68 9e-19 ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23... 69 1e-18 >ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1| predicted protein [Populus trichocarpa] Length = 408 Score = 68.9 bits (167), Expect(2) = 1e-19 Identities = 55/173 (31%), Positives = 88/173 (50%), Gaps = 33/173 (19%) Frame = +1 Query: 328 SKVIGSCNGIVCLVHGRH-VCLLNPYTREYKFVKLNKFSV----------SGVAIFGFGY 474 ++V+GSCNG++ L++ + L NP TRE K + ++ + S +GFG+ Sbjct: 91 TEVMGSCNGLLALLNSDFSIALYNPSTREKKMIPVSPLELPNDLDDSKVSSLFNFYGFGH 150 Query: 475 --IGEDYKLVRFV----NSPE--YSSEVAVYSVNHASCTTVISNIPYQL----------L 600 I EDYK+VRF+ +SP+ + EV VYS+ S I + PY L Sbjct: 151 DPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKR-IDDYPYDLRFILPPDYHPR 209 Query: 601 RRKESWVFLNGALHW----LGYAKDNFSKTIVSLNVGDKVFRDFSRPNVGVDE 747 R+ VF N A+HW +G K+N S IV+ ++G + F+ +P+ +E Sbjct: 210 CRRGYGVFANSAVHWKATVVGKGKENGSDLIVAFDLGAEEFKIIPQPDYSSNE 262 Score = 53.9 bits (128), Expect(2) = 1e-19 Identities = 24/46 (52%), Positives = 29/46 (63%) Frame = +2 Query: 71 EIVTEILTRLPAKSLLKFRCVCKTWCSLTYDPIFTKLHLARSIERH 208 EI +IL+RLP KSL +FRCV K+WC P F HL RS + H Sbjct: 6 EITADILSRLPVKSLKRFRCVSKSWCKEIDSPYFINTHLKRSSQAH 51 >emb|CBI40164.3| unnamed protein product [Vitis vinifera] Length = 423 Score = 67.0 bits (162), Expect(2) = 2e-19 Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 19/158 (12%) Frame = +1 Query: 331 KVIGSCNGIVCLVHGR--------HVCLLNPYTREYKFVK---LNKFSVSGVAIFGFGY- 474 +++GS NG++CL ++ L NP RE++ + +N F+ S + + G G+ Sbjct: 111 QIVGSSNGLICLTESNFKGSYLSLNLFLWNPAIREFQTLPKYHINNFT-SPLMVVGLGFA 169 Query: 475 ---IGEDYKLVRFVN-SPEYSSEVAVYSVNHASCTTVISNIPYQLLRRKESWVFLNGALH 642 + DYK+VR V +SE VYS+ S V +NI + S F+NGALH Sbjct: 170 FHPVINDYKVVRIVYFMRNKTSEADVYSLRTGSWRKVDANICCYI-HSNVSRTFINGALH 228 Query: 643 WLGYAK---DNFSKTIVSLNVGDKVFRDFSRPNVGVDE 747 WL K DN I+S ++ VF++ P+ G DE Sbjct: 229 WLAGKKNEMDNTDNLILSFDMAKDVFKEIMLPDFGYDE 266 Score = 54.7 bits (130), Expect(2) = 2e-19 Identities = 25/61 (40%), Positives = 37/61 (60%) Frame = +2 Query: 41 EQSTMANVPHEIVTEILTRLPAKSLLKFRCVCKTWCSLTYDPIFTKLHLARSIERHDVNL 220 + S N E + +I RLP KS+++FRCVCK+WC+L DP F +HL ++ + L Sbjct: 13 DNSMSGNFLSENLIDIHLRLPVKSIVRFRCVCKSWCTLFDDPDFISMHLRQASANSNGRL 72 Query: 221 L 223 L Sbjct: 73 L 73 >ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 414 Score = 61.2 bits (147), Expect(2) = 9e-19 Identities = 37/93 (39%), Positives = 51/93 (54%) Frame = +2 Query: 53 MANVPHEIVTEILTRLPAKSLLKFRCVCKTWCSLTYDPIFTKLHLARSIERHDVNLLATT 232 + +P E++TEILTRLP LL+FR + K+WC+ DP F K HL +S E + NL Sbjct: 2 LEKLPPELLTEILTRLPVDCLLRFRSISKSWCAKIDDPNFIKTHLKKSRETNS-NL---- 56 Query: 233 VVCKTQIYWGDGLDKTFKVKVPFGESPLKLPNP 331 T I+ G D + V + S +KL NP Sbjct: 57 ----TLIFAGSHPDYFYNVNLDSLNSIIKLENP 85 Score = 58.5 bits (140), Expect(2) = 9e-19 Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 18/155 (11%) Frame = +1 Query: 331 KVIGSCNGIVCLVHGR-HVCLLNPYTREYKFVKLNKF-------SVSGVAIFGFG--YIG 480 K++GSCNG++C + + L+NP TR++K + + SV G FGFG + Sbjct: 97 KIVGSCNGLLCFGNASGRITLMNPSTRKHKVLPFLRMDASVKGKSVWGAWAFGFGCDSVH 156 Query: 481 EDYKLVRF-----VNSPEYSSEVAVYSVNHASCTTVISNIPYQLLRRKESWVFLNGALHW 645 +DYK++R + ++ ++ VYS+ S I + + ++ V + ALHW Sbjct: 157 DDYKVIRLGQYLDFSLQQFETDTMVYSLKSNSWRK-IDGMSCIIGFDQKMGVLVGEALHW 215 Query: 646 LGYAKDNF---SKTIVSLNVGDKVFRDFSRPNVGV 741 L ++D IV+LN+G + FR+ P+V V Sbjct: 216 LA-SRDRILLNPDVIVALNLGVEDFREVPGPDVVV 249 >ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max] gi|255637050|gb|ACU18857.1| unknown [Glycine max] Length = 406 Score = 67.8 bits (164), Expect(2) = 9e-19 Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 5/74 (6%) Frame = +2 Query: 26 KSPYGEQSTMANVPHEIVTEILTRLPAKSLLKFRCVCKTWCSLTYDPIFTKLHLARS--- 196 + P E + +P E+V EIL+RLP KSLL+FRCVCK+W SL DP F K HL S Sbjct: 37 QQPMSESLPLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRC 96 Query: 197 --IERHDVNLLATT 232 H + L ATT Sbjct: 97 THFTHHRIILSATT 110 Score = 52.0 bits (123), Expect(2) = 9e-19 Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 10/143 (6%) Frame = +1 Query: 334 VIGSCNGIVCL-VHGRHVCLLNPYTREYKFVKL--NKFSVSGVAIFGFGY--IGEDYKLV 498 ++GSCNG++C + G V L NP R K N + FG GY + EDYK+V Sbjct: 148 IVGSCNGLLCFAIKGDCVLLWNPSIRVSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVV 207 Query: 499 R-FVNSPEYSSE--VAVYSVNHASCTTVISNIPYQLLRRKESWVFLNGALHWLGYAKDNF 669 F + EY E V VYS+ S I + P+ L + S F++G L+W Sbjct: 208 AVFCDPSEYFIECKVKVYSMATNSWRK-IQDFPHGFLPFQNSGKFVSGTLNWAANHSIGP 266 Query: 670 SK--TIVSLNVGDKVFRDFSRPN 732 S IVSL++ + +R+ P+ Sbjct: 267 SSFWVIVSLDLHKETYREVLPPD 289 >ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max] Length = 405 Score = 68.6 bits (166), Expect(2) = 1e-18 Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 5/62 (8%) Frame = +2 Query: 62 VPHEIVTEILTRLPAKSLLKFRCVCKTWCSLTYDPIFTKLHLARS-----IERHDVNLLA 226 +P E+V EIL+RLP KSLL+FRCVCK+W SL YDP F K HL S H + L A Sbjct: 49 LPDELVVEILSRLPVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTHFTHHRIILSA 108 Query: 227 TT 232 TT Sbjct: 109 TT 110 Score = 50.4 bits (119), Expect(2) = 1e-18 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 10/143 (6%) Frame = +1 Query: 334 VIGSCNGIVCL-VHGRHVCLLNPYTREYKFVKL--NKFSVSGVAIFGFGY--IGEDYKLV 498 ++GSCNG++C + G V L NP R K N + FG GY + EDYK+V Sbjct: 147 IVGSCNGLLCFAIKGDCVLLWNPSIRVSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVV 206 Query: 499 R-FVNSPEYSSE--VAVYSVNHASCTTVISNIPYQLLRRKESWVFLNGALHWLGYAKDNF 669 F + EY E V VYS+ S I + P+ + S F++G L+W Sbjct: 207 AVFCDPSEYFIECKVKVYSMATNSWRK-IQDFPHGFSPFQNSGKFVSGTLNWAANHSIGS 265 Query: 670 SK--TIVSLNVGDKVFRDFSRPN 732 S IVSL++ + +R+ P+ Sbjct: 266 SSLWVIVSLDLHKETYREVLPPD 288